RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 AMDHD1Q96NU7 426 aa4.57□□□□□ -1.68
COPA-203ENST00000481040 OR4F4Q96R69 305 aa4.57□□□□□ -1.68
COPA-203ENST00000481040 RPP25Q9BUL9 199 aaKnown RBP4.57□□□□□ -1.68
COPA-203ENST00000481040 NUP58Q9BVL2 599 aa4.57□□□□□ -1.68
COPA-203ENST00000481040 C1QTNF4Q9BXJ3 329 aa4.57□□□□□ -1.68
COPA-203ENST00000481040 ROPN1BQ9BZX4 212 aaPredicted RBP4.57□□□□□ -1.68
COPA-203ENST00000481040 DUS2Q9NX74 493 aaKnown RBP4.57□□□□□ -1.68
COPA-203ENST00000481040 UTP6Q9NYH9 597 aaKnown RBP4.57□□□□□ -1.68
COPA-203ENST00000481040 NLGN3Q9NZ94 848 aa4.57□□□□□ -1.68
COPA-203ENST00000481040 SLC9A8Q9Y2E8 581 aa4.57□□□□□ -1.68
COPA-203ENST00000481040 IFT52Q9Y366 437 aa4.57□□□□□ -1.68
COPA-203ENST00000481040 ZHX2Q9Y6X8 837 aa4.57□□□□□ -1.68
COPA-203ENST00000481040 ARPC4-TTLL3A0A0A6YYG9 625 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 GOLGA6L7A0A1B0GV03 622 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 A0A1W2PR80 420 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 NEDD8-MDP1E9PL57 170 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 CASKO14936 926 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 TPST2O60704 377 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 TRMUO75648 421 aaKnown RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 B3GAT3O94766 335 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 OAZ2O95190 189 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 NADKO95544 446 aaPredicted RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 IGSF6O95976 241 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 CLPTM1O96005 669 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 IGF1P05019 195 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 ATP1A1P05023 1023 aaKnown RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 FGF3P11487 239 aaPredicted RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 MYOGP15173 224 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 CASQ1P31415 396 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 CAPGP40121 348 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 MAGEA5P43359 124 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 MAGEA8P43361 318 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 ART1P52961 327 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 EWSR1Q01844 656 aaKnown RBP eCLIP4.56□□□□□ -1.68
COPA-203ENST00000481040 HNRNPDQ14103 355 aaKnown RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 MESDQ14696 234 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 GANABQ14697 944 aaKnown RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 ARHGAP19Q14CB8 494 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 CCDC6Q16204 474 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 SGSM1Q2NKQ1 1148 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 GTDC1Q4AE62 458 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 KCNIP4Q6PIL6 250 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 ATRAIDQ6UW56 229 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.56□□□□□ -1.68
COPA-203ENST00000481040 SH2D5Q6ZV89 423 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 CHMP1BQ7LBR1 199 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 NLRP9Q7RTR0 991 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 ANKRD37Q7Z713 158 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 ACOT1Q86TX2 421 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 SERINC5Q86VE9 423 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 TMEM17Q86X19 198 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 ECHDC2Q86YB7 292 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 SPATA2LQ8IUW3 424 aaPredicted RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 CLDN19Q8N6F1 224 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 OR9Q2Q8NGE9 314 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 LRRC15Q8TF66 581 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 SMAP2Q8WU79 429 aaPredicted RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 ART4Q93070 314 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 LHX4Q969G2 390 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 C18orf25Q96B23 403 aaPredicted RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 ZNF479Q96JC4 524 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 OVOL2Q9BRP0 275 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 MTG1Q9BT17 334 aaPredicted RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 CHRDL1Q9BU40 450 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 SLC25A51Q9H1U9 297 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 EXO5Q9H790 373 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 PLEKHA3Q9HB20 300 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 NMUR1Q9HB89 426 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 DCAF13Q9NV06 445 aaKnown RBP4.56□□□□□ -1.68
COPA-203ENST00000481040 KLK11Q9UBX7 282 aa4.56□□□□□ -1.68
COPA-203ENST00000481040 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.56□□□□□ -1.68
COPA-203ENST00000481040 DNAJC9-AS1A6NH13 148 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 FAM74A7A6NL05 159 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 SNTNA6NMZ2 147 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 LACTBL1A8MY62 500 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 CASC3O15234 703 aaKnown RBP4.55□□□□□ -1.68
COPA-203ENST00000481040 STX7O15400 261 aaKnown RBP4.55□□□□□ -1.68
COPA-203ENST00000481040 RANBP6O60518 1105 aaKnown RBP4.55□□□□□ -1.68
COPA-203ENST00000481040 CTAG2O75638 210 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 NDUFB10O96000 172 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 OAS1P00973 400 aaKnown RBP4.55□□□□□ -1.68
COPA-203ENST00000481040 NGFRP08138 427 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 PABPC4LP0CB38 370 aaKnown RBP4.55□□□□□ -1.68
COPA-203ENST00000481040 ADORA3P0DMS8 318 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 NCK1P16333 377 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 TBXA2RP21731 343 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 EDNRAP25101 427 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 CCT3P49368 545 aaKnown RBP4.55□□□□□ -1.68
COPA-203ENST00000481040 CDH4P55283 916 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 GUCY2DQ02846 1103 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 TGM3Q08188 693 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 BNIP1Q12981 228 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 GCKRQ14397 625 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 TMEM44Q2T9K0 475 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 GLIPR1L2Q4G1C9 344 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 FAM74A3Q4VXF1 159 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 CARD17Q5XLA6 110 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 ATL3Q6DD88 541 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 DOK6Q6PKX4 331 aa4.55□□□□□ -1.68
COPA-203ENST00000481040 BTNL3Q6UXE8 466 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms