RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ELP4Q96EB1 424 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 SLC7A11Q9UPY5 501 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 C13orf42A0A1B0GVH6 325 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 FAM230AA0A1W2PPH8 454 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 GGT3PA6NGU5 568 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 GLTPD2A6NH11 291 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 TTC34A8MYJ7 566 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 FKTNO75072 461 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 MT-CO2P00403 227 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 ACP5P13686 325 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 JUNDP17535 347 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 TGM4P49221 684 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 GZMKP49863 264 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 SLC35A2P78381 396 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 RSU1Q15404 277 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 BCL2A1Q16548 175 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 DUSP6Q16828 381 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 AMZ1Q400G9 498 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 AKR1C8PQ5T2L2 129 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 UBE2UQ5VVX9 321 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 KLBQ86Z14 1044 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 CASTOR1Q8WTX7 329 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 GAL3ST3Q96A11 431 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 C16orf58Q96GQ5 468 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 OR2M4Q96R27 311 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 CPPED1Q9BRF8 314 aaPredicted RBP5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 CDCA4Q9BXL8 241 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 CARS2Q9HA77 564 aaKnown RBP5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 TPRP12270 2363 aaKnown RBP5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 C9J4A7 227 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 FOXE1O00358 373 aaPredicted RBP5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 HBE1P02100 147 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 OR8U9P0C7N5 309 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 PRKACAP17612 351 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 RAB3AP20336 220 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 HOXC12P31275 282 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 THBS2P35442 1172 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 CASP3P42574 277 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 PLP2Q04941 152 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 GK2Q14410 553 aaPredicted RBP5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 PTPRRQ15256 657 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 SLC18B1Q6NT16 456 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 ERN2Q76MJ5 926 aaKnown RBP5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 TRIM46Q7Z4K8 759 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 MRPL10Q7Z7H8 261 aaKnown RBP5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 POGLUT1Q8NBL1 392 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 NUP43Q8NFH3 380 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 OR6N2Q8NGY6 317 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 OR5AK3PQ8NH89 298 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 FIBINQ8TAL6 211 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 MZB1Q8WU39 189 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 PIGKQ92643 395 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 C3orf49Q96BT1 292 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 PRAP1Q96NZ9 151 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 GAL3ST4Q96RP7 486 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 C17orf62Q9BQA9 187 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 RNF39Q9H2S5 420 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 TMPRSS11EQ9UL52 423 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 GPR34Q9UPC5 381 aa5.84□□□□□ -1.47
PRPF4B-205ENST00000480058 C17orf113A0A1B0GUU1 675 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 ADH1BP00325 375 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 EDN1P05305 212 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 NUDT7P0C024 238 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 DDCP20711 480 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 SPINT3P49223 89 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 SNRPGP62308 76 aaKnown RBP5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 ITPRIPL2Q3MIP1 535 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 RAB11FIP2Q7L804 512 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 ZSCAN1Q8NBB4 408 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 LFNGQ8NES3 379 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 GIMAP5Q96F15 307 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 NSUN5Q96P11 429 aaKnown RBP5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 AP1S3Q96PC3 154 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 PIGMQ9H3S5 423 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 SCPEP1Q9HB40 452 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 SLC22A11Q9NSA0 550 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 ERVK13-1Q9NX77 482 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 SCML1Q9UN30 329 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 MOKQ9UQ07 419 aa5.84□□□□□ -1.48
PRPF4B-205ENST00000480058 SHPRHQ149N8 1683 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 BPNT1O95861 308 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 SCG5P05408 212 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 CSN2P05814 226 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 ADRB3P13945 408 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 CD1EP15812 388 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 PPP3CBP16298 524 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 CCR9P51686 369 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 RAB8AP61006 207 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 RBMS2Q15434 407 aaKnown RBP5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 COMMD7Q86VX2 200 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 CCDC71Q8IV32 467 aaPredicted RBP5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 ADGRF3Q8IZF5 1079 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 CLIP4Q8N3C7 705 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 PARP16Q8N5Y8 322 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 FBXO27Q8NI29 283 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 PPP1R35Q8TAP8 253 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 CD300LFQ8TDQ1 290 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 ASB17Q8WXJ9 295 aa5.83□□□□□ -1.48
PRPF4B-205ENST00000480058 IRF7Q92985 503 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms