RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CCL26Q9Y258 94 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 NUP205Q92621 2012 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ABCA7Q8IZY2 2146 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 SHROOM3Q8TF72 1996 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 KIF26AQ9ULI4 1882 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 hCG_1818297A0A087WSY0 165 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 NEMP2A6NFY4 417 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 ARHGAP42A6NI28 874 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 ZNF487B1APH4 448 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 NEDD8-MDP1E9PL57 170 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 H7C0C1 242 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 PGRMC1O00264 195 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 DFFAO00273 331 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 MCF2LO15068 1137 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CHADO15335 359 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CST8O60676 142 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CLDN11O75508 207 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 ECI2O75521 394 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CDC123O75794 336 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 ZNF189O75820 626 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 AP2A2O94973 939 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 LUC7L3O95232 432 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 FGGP02679 453 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 RHOCP08134 193 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 IL9P15248 144 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 ERCC2P18074 760 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 DNASE1P24855 282 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 SHC1P29353 583 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 OR1E1P30953 314 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 GDI1P31150 447 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CDKN2BP42772 138 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 ATP5OP48047 213 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 ASCL1P50553 236 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CSE1LP55060 971 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 VCPP55072 806 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 CDH4P55283 916 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 TPD52P55327 224 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 RPS24P62847 133 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 EIF4EBP2Q13542 120 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 HTR4Q13639 388 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 P2RY6Q15077 328 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 WHAMMP3Q1A5X7 153 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 KLHL26Q53HC5 615 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 SYT14P1Q58G82 188 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 FAM133BQ5BKY9 247 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 TCTEX1D4Q5JR98 221 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 DCAF10Q5QP82 559 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 ELFN2Q5R3F8 820 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 ARMC4Q5T2S8 1044 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 KRT80Q6KB66 452 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 RPUSD3Q6P087 351 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 VITQ6UXI7 678 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CYP4V2Q6ZWL3 525 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 SETD3Q86TU7 594 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 SLC13A5Q86YT5 568 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 OR8H2Q8N162 312 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CEP112Q8N8E3 955 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 PHLDA1Q8WV24 401 aaPredicted RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 P3H4Q92791 437 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 FGF14Q92915 247 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 NXNL1Q96CM4 212 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 HAUS1Q96CS2 278 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CSPG4P5Q96PW8 444 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 RNF157Q96PX1 679 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 PRMT1Q99873 361 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 LINC00597Q9H2U6 94 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 TBC1D17Q9HA65 648 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 Q9N2K0 584 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 SPHK2Q9NRA0 654 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 HOMER3Q9NSC5 361 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 INTS9Q9NV88 658 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 EPS15L1Q9UBC2 864 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 RNF14Q9UBS8 474 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 XPO7Q9UIA9 1087 aaKnown RBP3.46□□□□□ -1.86
UBR3-209ENST00000477461 STOML2Q9UJZ1 356 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 HPCAL4Q9UM19 191 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 PADI2Q9Y2J8 665 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 HEY1Q9Y5J3 304 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 SNX10Q9Y5X0 201 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 MIA3Q5JRA6 1907 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 TICRRQ7Z2Z1 1910 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 CENPFP49454 3210 aa3.46□□□□□ -1.86
UBR3-209ENST00000477461 IGLV3-10A0A075B6K4 115 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 ILVBLA1L0T0 632 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CTAGE15A4D2H0 777 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 HACD1B0YJ81 288 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 ANHXE9PGG2 379 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 CCDC188H7C350 402 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 APOC4-APOC2K7ER74 178 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 KLF11O14901 512 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 GAS8O95995 478 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 APOC2P02655 101 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 IGHV4-31P0DP07 118 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 POLR2EP19388 210 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 FCARP24071 287 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 IL4RP24394 825 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 EEF1DP29692 281 aaKnown RBP3.45□□□□□ -1.86
UBR3-209ENST00000477461 PCGF2P35227 344 aa3.45□□□□□ -1.86
UBR3-209ENST00000477461 NDST2P52849 883 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms