RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 C17orf47Q8NEP4 570 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 RHEBL1Q8TAI7 183 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 MBD6Q96DN6 1003 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 UBXN10Q96LJ8 280 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 ERVK-6Q9BXR3 956 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 WWTR1Q9GZV5 400 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 ALG9Q9H6U8 611 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 CALHM2Q9HA72 323 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 CCM2LQ9NUG4 571 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-214ENST00000477152 CAMK2AQ9UQM7 478 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 ERVK-19Q9WJR5 959 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 SNX24Q9Y343 169 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 LIPGQ9Y5X9 500 aa6.65□□□□□ -1.34
BRCA1-214ENST00000477152 CTAGE15A4D2H0 777 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CD8B2A6NJW9 211 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 H0YIV9 168 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 FOXE1O00358 373 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ARHGEF9O43307 516 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PROM1O43490 865 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SEMA3DO95025 777 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 IGKV3-11P04433 115 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 RHOXF2BP0C7M4 288 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 FAM58BPP0C7Q3 252 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CYP4B1P13584 511 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 KLK2P20151 261 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CTSSP25774 331 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PHBP35232 272 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 NR0B1P51843 470 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PGGT1BP53609 377 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ALDH18A1P54886 795 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 DCAF7P61962 342 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ID2Q02363 134 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 DUSP8Q13202 625 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 GAB1Q13480 694 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ACAP2Q15057 778 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 OR4D1Q15615 310 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ZKSCAN8Q15776 578 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PRAMEF20Q5VT98 475 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 NSUN5P2Q63ZY6 315 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 TTC19Q6DKK2 380 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 RTL6Q6ICC9 239 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SLC30A6Q6NXT4 461 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ZNF793Q6ZN11 406 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 TAOK1Q7L7X3 1001 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CTAGE6Q86UF2 777 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 C9orf40Q8IXQ3 194 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 RPRMLQ8N4K4 120 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 OR4K14Q8NGD5 310 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 OR1J4Q8NGS1 313 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 HUS1BQ8NHY5 278 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 NTNG2Q96CW9 530 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 GPATCH1Q9BRR8 931 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ERP44Q9BS26 406 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 OR51B5Q9H339 312 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 DDX31Q9H8H2 851 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 METTL7AQ9H8H3 244 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CAB39LQ9H9S4 337 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SH2D2AQ9NP31 389 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 TNFRSF12AQ9NP84 129 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 DMRT3Q9NQL9 472 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 C14orf119Q9NWQ9 140 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 TRMT1Q9NXH9 659 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 NDRG3Q9UGV2 375 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ATP23Q9Y6H3 246 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 OTOGQ6ZRI0 2925 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 A0A0G2JMM0 328 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 MYOCOSA0A1B0GUC4 107 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 A0A1W2PPB8 328 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 A0A1W2PRS3 328 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 TCRBV9S1A1TA0A576 114 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 FAM159BA6NKW6 160 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 KIR3DP1A8MWS1 328 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SAP18O00422 153 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 RTCAO00442 366 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 BCAS2O75934 225 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CLDN9O95484 217 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 HPNP05981 417 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CHMP24386 653 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SSTR1P30872 391 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CEACAM8P31997 349 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 KRT20P35900 424 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CDK9P50750 372 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SLC37A1P57057 533 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SCAND1P57086 179 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 MRPS22P82650 360 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 IFT88Q13099 833 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SNTA1Q13424 505 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 EBPQ15125 230 aaKnown RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CEBPEQ15744 281 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ACSF3Q4G176 576 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-214ENST00000477152 NHSL2Q5HYW2 709 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CHMP1BQ7LBR1 199 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 NUP54Q7Z3B4 507 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 BIVMQ86UB2 503 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 CDC20BQ86Y33 519 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 OR4N5Q8IXE1 308 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 SPATA6LQ8N4H0 392 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 PPM1NQ8N819 430 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 ZNF321PQ8N8H1 164 aa6.64□□□□□ -1.35
BRCA1-214ENST00000477152 GBP7Q8N8V2 638 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms