RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 LRTM1Q9HBL6 345 aa29.4■■■□□ 2.3
CHKB-207ENST00000476289 C1orf109Q9NX04 203 aa29.4■■■□□ 2.3
CHKB-207ENST00000476289 KLRF1Q9NZS2 232 aa29.4■■■□□ 2.3
CHKB-207ENST00000476289 Q9UFV3 132 aa29.4■■■□□ 2.3
CHKB-207ENST00000476289 WBP11Q9Y2W2 641 aaKnown RBP29.4■■■□□ 2.3
CHKB-207ENST00000476289 SLC6A5Q9Y345 797 aa29.4■■■□□ 2.3
CHKB-207ENST00000476289 ARHGAP21Q5T5U3 1957 aa29.4■■■□□ 2.3
CHKB-207ENST00000476289 INTS1Q8N201 2190 aaKnown RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 OR6C70A6NIJ9 312 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 TMEM233B4DJY2 109 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 SLC28A1O00337 649 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 SNPHO15079 494 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 REM1O75628 298 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 SLU7O95391 586 aaKnown RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 GABRA1P14867 456 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 ELAVL4P26378 380 aaKnown RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 EIPR1Q53HC9 387 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 TMEM107Q6UX40 140 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 MEX3BQ6ZN04 569 aaKnown RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 OR1J4Q8NGS1 313 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 SLC35A4Q96G79 324 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 METTL2AQ96IZ6 378 aaKnown RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 TREX2Q9BQ50 279 aaPredicted RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 ROPN1BQ9BZX4 212 aaPredicted RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 STMN4Q9H169 189 aaPredicted RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 GLIPR2Q9H4G4 154 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 ROPN1Q9HAT0 212 aaPredicted RBP29.39■■■□□ 2.3
CHKB-207ENST00000476289 PCDHGB3Q9Y5G1 929 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 DNAJC15Q9Y5T4 150 aa29.39■■■□□ 2.3
CHKB-207ENST00000476289 TSPAN2O60636 221 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 CREB1P16220 341 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 SNTA1Q13424 505 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 TOMM20Q15388 145 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 RNF165Q6ZSG1 346 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 OR4N2Q8NGD1 307 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 TCP10LQ8TDR4 215 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 FCRL1Q96LA6 429 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 AMDHD1Q96NU7 426 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 ADOQ96SZ5 270 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 TIMP4Q99727 224 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 KCNJ16Q9NPI9 418 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 SERHLQ9NQF3 203 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 TAS2R9Q9NYW1 312 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 MAPRE3Q9UPY8 281 aa29.38■■■□□ 2.29
CHKB-207ENST00000476289 MED12Q93074 2177 aa29.37■■■□□ 2.29
CHKB-207ENST00000476289 A0A087WV62 115 aa29.37■■■□□ 2.29
CHKB-207ENST00000476289 RGS14O43566 566 aa29.37■■■□□ 2.29
CHKB-207ENST00000476289 HOXD4P09016 255 aaPredicted RBP29.37■■■□□ 2.29
CHKB-207ENST00000476289 LINC00032P0C843 101 aa29.37■■■□□ 2.29
CHKB-207ENST00000476289 IGFBP2P18065 325 aa29.37■■■□□ 2.29
CHKB-207ENST00000476289 NTSP30990 170 aa29.37■■■□□ 2.29
CHKB-207ENST00000476289 ZNF155Q12901 538 aaPredicted RBP29.37■■■□□ 2.29
CHKB-207ENST00000476289 WIPI1Q5MNZ9 446 aaPredicted RBP29.37■■■□□ 2.29
CHKB-207ENST00000476289 DCST1Q5T197 706 aa29.37■■■□□ 2.29
CHKB-207ENST00000476289 SEM1Q6ZVN7 128 aa29.37■■■□□ 2.29
CHKB-207ENST00000476289 SLC44A2Q8IWA5 706 aaPredicted RBP29.37■■■□□ 2.29
CHKB-207ENST00000476289 GFM2Q969S9 779 aaKnown RBP29.37■■■□□ 2.29
CHKB-207ENST00000476289 KDM4EB2RXH2 506 aaPredicted RBP29.36■■■□□ 2.29
CHKB-207ENST00000476289 NPHS1O60500 1241 aa29.36■■■□□ 2.29
CHKB-207ENST00000476289 PSG6Q00889 435 aa29.36■■■□□ 2.29
CHKB-207ENST00000476289 ARL13AQ5H913 290 aaPredicted RBP29.36■■■□□ 2.29
CHKB-207ENST00000476289 ANKRD26P1Q6NSI1 321 aa29.36■■■□□ 2.29
CHKB-207ENST00000476289 ZCCHC23Q6ZST2 131 aa29.36■■■□□ 2.29
CHKB-207ENST00000476289 YRDCQ86U90 279 aaKnown RBP29.36■■■□□ 2.29
CHKB-207ENST00000476289 LIX1LQ8IVB5 337 aa29.36■■■□□ 2.29
CHKB-207ENST00000476289 WDSUB1Q8N9V3 476 aa29.36■■■□□ 2.29
CHKB-207ENST00000476289 FAM83FQ8NEG4 500 aaPredicted RBP29.36■■■□□ 2.29
CHKB-207ENST00000476289 TMCO6Q96DC7 493 aa29.36■■■□□ 2.29
CHKB-207ENST00000476289 C19orf53Q9UNZ5 99 aaPredicted RBP29.36■■■□□ 2.29
CHKB-207ENST00000476289 POLQO75417 2590 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 UPK1AO00322 258 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 PLOD2O00469 737 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 ZNF500O60304 480 aaPredicted RBP29.35■■■□□ 2.29
CHKB-207ENST00000476289 ABCB7O75027 752 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 COQ9O75208 318 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 SLITRK5O94991 958 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 PSMG1O95456 288 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 NEFHP12036 1026 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 SDC1P18827 310 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 MSX1P28360 303 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 ZFP36L2P47974 494 aaKnown RBP29.35■■■□□ 2.29
CHKB-207ENST00000476289 RPL38P63173 70 aaKnown RBP29.35■■■□□ 2.29
CHKB-207ENST00000476289 UGT3A2Q3SY77 523 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 ACSF3Q4G176 576 aaPredicted RBP29.35■■■□□ 2.29
CHKB-207ENST00000476289 RFTN2Q52LD8 501 aaPredicted RBP29.35■■■□□ 2.29
CHKB-207ENST00000476289 VASNQ6EMK4 673 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 LARP4Q71RC2 724 aaKnown RBP eCLIP29.35■■■□□ 2.29
CHKB-207ENST00000476289 EFHD2Q96C19 240 aaPredicted RBP29.35■■■□□ 2.29
CHKB-207ENST00000476289 CCT7Q99832 543 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 UGT2B28Q9BY64 529 aa29.35■■■□□ 2.29
CHKB-207ENST00000476289 LSM1O15116 133 aaKnown RBP29.34■■■□□ 2.29
CHKB-207ENST00000476289 CHEK2O96017 543 aa29.34■■■□□ 2.29
CHKB-207ENST00000476289 FGF4P08620 206 aa29.34■■■□□ 2.29
CHKB-207ENST00000476289 BMP7P18075 431 aa29.34■■■□□ 2.29
CHKB-207ENST00000476289 IL12BP29460 328 aa29.34■■■□□ 2.29
CHKB-207ENST00000476289 ARRB2P32121 409 aa29.34■■■□□ 2.29
CHKB-207ENST00000476289 WNT3P56703 355 aa29.34■■■□□ 2.29
CHKB-207ENST00000476289 NHSL2Q5HYW2 709 aa29.34■■■□□ 2.29
CHKB-207ENST00000476289 RIPPLY2Q5TAB7 128 aa29.34■■■□□ 2.29
CHKB-207ENST00000476289 OR2L13Q8N349 312 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms