RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ZFP14Q9HCL3 533 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 POLE4Q9NR33 117 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 CHRAC1Q9NRG0 131 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 C2orf42Q9NWW7 574 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 GCNT4Q9P109 453 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 ZMAT5Q9UDW3 170 aaKnown RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 FAF1Q9UNN5 650 aaPredicted RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 STK38LQ9Y2H1 464 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 CCDC7Q96M83 1385 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 MYH14Q7Z406 1995 aaKnown RBP3.7□□□□□ -1.82
VPS13D-207ENST00000476169 RIMBP3CA6NJZ7 1639 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 RIMBP3BA6NNM3 1639 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 RIMBP3Q9UFD9 1639 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 BIVM-ERCC5R4GMW8 1640 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 KIAA0586Q9BVV6 1533 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 PHLPP2Q6ZVD8 1323 aa3.7□□□□□ -1.82
VPS13D-207ENST00000476169 RAPGEF2Q9Y4G8 1499 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 PLEKHG2Q9H7P9 1386 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 NINLQ9Y2I6 1382 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 IGLV5-45A0A087WSX0 123 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 SAA2-SAA4A0A096LPE2 208 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 A0A1B0GTQ1 180 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ASPDHA6ND91 283 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 FAM74A7A6NL05 159 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 SNTNA6NMZ2 147 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 POLR3GO15318 223 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ATP6V0E1O15342 81 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 NVLO15381 856 aaKnown RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 KCNAB3O43448 404 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 DUX1O43812 170 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 LRATO95237 230 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 FCER2P06734 321 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 TNNI1P19237 187 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 AADACP22760 399 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 CDKN2AP42771 156 aaKnown RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 CD151P48509 253 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 CCT3P49368 545 aaKnown RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 NDST1P52848 882 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 BACE1P56817 501 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 OR1D5P58170 312 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 HERV-K104P61576 105 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 RPS15P62841 145 aaKnown RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 TFDP1Q14186 410 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 MESDQ14696 234 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 GANABQ14697 944 aaKnown RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 CDKN3Q16667 212 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 TMEM44Q2T9K0 475 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ZNF699Q32M78 642 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 FAM74A3Q4VXF1 159 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 FBXO48Q5FWF7 155 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 PDZK1Q5T2W1 519 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ATP1A1-AS1Q5TC04 95 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 AGAP7PQ5VUJ5 663 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 OR2A2Q6IF42 318 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 SCYL2Q6P3W7 929 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 RNASEKQ6P5S7 137 aaKnown RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 UNQ6126/PRO20091Q6UXV3 157 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ZNF562Q6V9R5 426 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ISCA2Q86U28 154 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ITIH5Q86UX2 942 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 RANBP3LQ86VV4 465 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 KATNAL2Q8IYT4 538 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 CEP112Q8N8E3 955 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 DRAXINQ8NBI3 349 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ICA1LQ8NDH6 482 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 NFAM1Q8NET5 270 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 OR1L4Q8NGR5 311 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 LNX1Q8TBB1 728 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 M1APQ8TC57 530 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ISG20Q96AZ6 181 aaKnown RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 TADA1Q96BN2 335 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 AGAP4Q96P64 663 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 COPS8Q99627 209 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 CENPKQ9BS16 269 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 EBF2Q9HAK2 575 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ZBTB20Q9HC78 741 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 MCCC2Q9HCC0 563 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ZNF160Q9HCG1 818 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 LZTFL1Q9NQ48 299 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 TEX10Q9NXF1 929 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 GPR83Q9NYM4 423 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 KLRF1Q9NZS2 232 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 PISDQ9UG56 409 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ADAM28Q9UKQ2 775 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 ELF5Q9UKW6 265 aaPredicted RBP3.69□□□□□ -1.82
VPS13D-207ENST00000476169 EMCNQ9ULC0 261 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 GSTK1Q9Y2Q3 226 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 WIPI2Q9Y4P8 454 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 PTPRGP23470 1445 aa3.69□□□□□ -1.82
VPS13D-207ENST00000476169 A8MU76 341 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ANHXE9PGG2 379 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 SLC1A7O00341 560 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 SIGLEC5O15389 551 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ARHGEF9O43307 516 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 TSPAN2O60636 221 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 LRCH4O75427 683 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 CDK2AP2O75956 126 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 DFFBO76075 338 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms