RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 CALCRP30988 508 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SHMT2P34897 504 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 LIPAP38571 399 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ARL4AP40617 200 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 PRKXP51817 358 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 AP3S2P59780 193 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 TRA2BP62995 288 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ADARB1P78563 741 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 TFAMQ00059 246 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 GPS1Q13098 491 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 RPS6KA2Q15349 733 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 CHI3L2Q15782 390 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 VPS26BQ4G0F5 336 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 C14orf28Q4W4Y0 310 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SOWAHCQ53LP3 525 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ACTBL2Q562R1 376 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 COQ5Q5HYK3 327 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SYT6Q5T7P8 510 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 TSSK4Q6SA08 328 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 PLET1Q6UQ28 207 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SCIMPQ6UWF3 145 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 PRSS57Q6UWY2 283 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 WASH2PQ6VEQ5 465 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 CYHR1Q6ZMK1 362 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 LHFPL4Q7Z7J7 247 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 DCUN1D3Q8IWE4 304 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ZCCHC9Q8N567 271 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 MS4A15Q8N5U1 240 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 PQLC3Q8N755 202 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 RASGEF1AQ8N9B8 481 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 C8orf58Q8NAV2 365 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 CCDC54Q8NEL0 328 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 OR5T3Q8NGG3 340 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 OR2T4Q8NH00 348 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 LKAAEAR1Q8TD35 194 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 C16orf78Q8WTQ4 265 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ACOT11Q8WXI4 607 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ATG4AQ8WYN0 398 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 DPF1Q92782 380 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 HGDQ93099 445 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 LGALS12Q96DT0 336 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SCMH1Q96GD3 660 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 LRR1Q96L50 414 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ZNF48Q96MX3 618 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 EBNA1BP2Q99848 306 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 CITED2Q99967 270 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 MGME1Q9BQP7 344 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 EBF4Q9BQW3 602 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 CPPED1Q9BRF8 314 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SLC30A2Q9BRI3 323 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 IFT27Q9BW83 186 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 C1QTNF3Q9BXJ4 246 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 NLNQ9BYT8 704 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 WDCPQ9H6R7 721 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 CACYBPQ9HB71 228 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 C3orf14Q9HBI5 128 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ERVK-5Q9HDB9 667 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ASAH2Q9NR71 780 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 PDGFCQ9NRA1 345 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ACSS1Q9NUB1 689 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 POT1Q9NUX5 634 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 FBXO34Q9NWN3 711 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 AASSQ9UDR5 926 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 TMEM184BQ9Y519 407 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 MYH4Q9Y623 1939 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 C4BP0C0L5 1744 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 A0A075B6Q4 140 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 A0A087X0T9 212 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 A0A0D9SFI3 127 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 A0A0G2JLW4 131 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 RNF103-CHMP3A0A140T963 221 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 A0A1B0GVI7 797 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 TBC1D3FA6NER0 549 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 GLTPD2A6NH11 291 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 DUXAA6NLW8 204 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 EFCAB9A8MZ26 197 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 TISP43B9A030 160 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 B9A039 149 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 D6RAR5 112 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 BLOC1S5-TXNDC5H3BN57 136 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 TEX46H3BTG2 121 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 M0R233 179 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 QSOX1O00391 747 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 DLGAP1O14490 977 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SOCS2O14508 198 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 BCAT2O15382 392 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 COCHO43405 550 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SNNO75324 88 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 ENTPD3O75355 529 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 SORBS2O94875 1100 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 MLYCDO95822 493 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 TBX18O95935 607 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 GLUD1P00367 558 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 PNPP00491 289 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 AK1P00568 194 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 IFNA17P01571 189 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 NR3C1P04150 777 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 AMY1AP04745 511 aa5.64□□□□□ -1.51
ECHDC1-215ENST00000475319 CRYBA1P05813 215 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms