RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ABCC6O95255 1503 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 KCPQ6ZWJ8 1503 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 F5H5K5 113 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 H0YAE9 185 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 STT3AP46977 705 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 CRISP1P54107 249 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 NAGSQ8N159 534 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 HS6ST2Q96MM7 605 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 UHRF1Q96T88 793 aaPredicted RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 NELFAQ9H3P2 528 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 UBR2Q8IWV8 1755 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 M0R3H8 397 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 HSD3B1P14060 373 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 MTNR1AP48039 350 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 PTH2RP49190 550 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 PLGLAQ15195 96 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 SMAD2Q15796 467 aaKnown RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 SFRP4Q6FHJ7 346 aaPredicted RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 ARHGAP11AQ6P4F7 1023 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 LARP4Q71RC2 724 aaKnown RBP eCLIP10.41□□□□□ -0.74
VAPB-204ENST00000475243 NRMQ8IXM6 262 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 FIBINQ8TAL6 211 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 KLHL15Q96M94 604 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 SORBS1Q9BX66 1292 aaKnown RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 SYT4Q9H2B2 425 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 SYNPO2LQ9H987 977 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 TMEM14AQ9Y6G1 99 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 NPIPA5A0A0B4J1W7 369 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 NOTOA8MTQ0 251 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 ZNF487B1APH4 448 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 NPIPA7E9PJI5 369 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 NPIPA8P0DM63 369 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 CNR2P34972 360 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 PRAMEF8Q5VWM4 474 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 PRAMEF7Q5VXH5 474 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 KIAA0895LQ68EN5 471 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 MSANTD3Q96H12 275 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 SLC2A11Q9BYW1 496 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 LMAN1LQ9HAT1 526 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 CACNA1CQ13936 2221 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 NUP188Q5SRE5 1749 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 SLC22A31A6NKX4 558 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 EEF1E1-BLOC1S5C9J1V9 151 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 PTGESO14684 152 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 DIRAS3O95661 229 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 MC3RP41968 323 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 SNTB2Q13425 540 aaKnown RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 GRM7Q14831 915 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 CLLU1OSQ5K130 101 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 GRHL2Q6ISB3 625 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 HAGHLQ6PII5 290 aaPredicted RBP10.41□□□□□ -0.74
VAPB-204ENST00000475243 HACD2Q6Y1H2 254 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 CYB561A3Q8NBI2 242 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 THRSPQ92748 146 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 DPH1Q9BZG8 443 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 RGCCQ9H4X1 137 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 KLHL21Q9UJP4 597 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 DNAJC15Q9Y5T4 150 aa10.41□□□□□ -0.74
VAPB-204ENST00000475243 MYO7AQ13402 2215 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 PEX14O75381 377 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 MT-ND2P03891 347 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 PROS1P07225 676 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ETV5P41161 510 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 GPR157Q5UAW9 335 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 OR5M10Q6IEU7 315 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 HMBOX1Q6NT76 420 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ISCA2Q86U28 154 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ACTRT3Q9BYD9 372 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 KLHL9Q9P2J3 617 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 SLC7A7Q9UM01 511 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 STUB1Q9UNE7 303 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 KIAA0355O15063 1070 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 FDXRP22570 491 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 HMGCLP35914 325 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 C1orf220Q5T0J3 134 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 BEST3Q8N1M1 668 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 FRS2Q8WU20 508 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 TSPEARQ8WU66 669 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ARMC1Q9NVT9 282 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 CNIH4Q9P003 139 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 PTBP2Q9UKA9 531 aaKnown RBP10.4□□□□□ -0.74
VAPB-204ENST00000475243 CLCN2P51788 898 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 SCAPQ12770 1279 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 STK11Q15831 433 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ZNF791Q3KP31 576 aaPredicted RBP10.4□□□□□ -0.74
VAPB-204ENST00000475243 CPT1CQ8TCG5 803 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 EBF1Q9UH73 591 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 SPO11Q9Y5K1 396 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 NPIPB15A6NHN6 443 aaPredicted RBP10.4□□□□□ -0.74
VAPB-204ENST00000475243 ACTL6BO94805 426 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 BMP1P13497 986 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 C10orf62Q5T681 223 aaPredicted RBP10.4□□□□□ -0.74
VAPB-204ENST00000475243 MANEALQ5VSG8 457 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ABHD17BQ5VST6 288 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 AADACL4Q5VUY2 407 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 BORCS7-ASMTA0A0B4J1R7 106 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 CCDC163A0A0D9SF12 145 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 ACOT7O00154 380 aa10.4□□□□□ -0.74
VAPB-204ENST00000475243 SMAD6O43541 496 aaKnown RBP10.4□□□□□ -0.74
VAPB-204ENST00000475243 APBB3O95704 486 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms