RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 IGHV3-20A0A0C4DH32 117 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 TRBV11-1A0A0K0K1C0 115 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 A8MVJ9 347 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ACOT8O14734 319 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 PSMG1O95456 288 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 H6PDO95479 791 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 BAG2O95816 211 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 NUDT7P0C024 238 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ACP2P11117 423 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 LIPCP11150 499 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ATP6V1B2P21281 511 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 MMP11P24347 488 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 KDELR2P33947 212 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 TMED10P49755 219 aaKnown RBP9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 MS4A2Q01362 244 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 RHDQ02161 417 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 MYBPC3Q14896 1274 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 LARS2Q15031 903 aaKnown RBP9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 RCN1Q15293 331 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 DUSP5Q16690 384 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 EIPR1Q53HC9 387 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 AAGABQ6PD74 315 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 TMEM205Q6UW68 189 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF517Q6ZMY9 492 aaPredicted RBP9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 DGAT2L6Q6ZPD8 337 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 GPR155Q7Z3F1 870 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 WDR53Q7Z5U6 358 aaPredicted RBP9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 PTOV1Q86YD1 416 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 TAGAPQ8N103 731 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF614Q8N883 585 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF527Q8NB42 609 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC16A11Q8NCK7 471 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC38A5Q8WUX1 472 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 NACC2Q96BF6 587 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 LCORQ96JN0 433 aaPredicted RBP9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 COL21A1Q96P44 957 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 SEPHS2Q99611 448 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 LMF2Q9BU23 707 aaKnown RBP9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ITPAQ9BY32 194 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 DEFB126Q9BYW3 111 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 TRIM4Q9C037 500 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 RASSF4Q9H2L5 321 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 POLE3Q9NRF9 147 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 DLL3Q9NYJ7 618 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 GMPR2Q9P2T1 348 aaKnown RBP9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF639Q9UID6 485 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 USP22Q9UPT9 525 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 IFT52Q9Y366 437 aa9.55□□□□□ -0.88
PRPF38A-202ENST00000474048 PTPRBP23467 1997 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 FRG2CA6NGY1 282 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 GNGT2O14610 69 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 ACOX3O15254 700 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 ZFAND5O76080 213 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 NKX2-2O95096 273 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 PGM3O95394 542 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 C8BP07358 591 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 ETS2P15036 469 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 IL7RP16871 459 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 ITGA2P17301 1181 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 IFNA8P32881 189 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 TRHRP34981 398 aaPredicted RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 PPICP45877 212 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 CLK3P49761 638 aaKnown RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 EMDP50402 254 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 GZMMP51124 257 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 MVDP53602 400 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC37A1P57057 533 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC26A5P58743 744 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 PLCXD2Q0VAA5 305 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 MGAT2Q10469 447 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 CCNIQ14094 377 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 PUM1Q14671 1186 aaKnown RBP eCLIP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 GPR68Q15743 365 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 SNCBQ16143 134 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 NNATQ16517 81 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 SYPL1Q16563 259 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 ARHGAP11BQ3KRB8 267 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 CYP27C1Q4G0S4 372 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 FLYWCH1Q4VC44 716 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 CYBRD1Q53TN4 286 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 RPS26P11Q5JNZ5 115 aaPredicted RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 IGF2-ASQ6U949 168 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 LRRC74BQ6ZQY2 392 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 NDUFAF7Q7L592 441 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 TIPARPQ7Z3E1 657 aaKnown RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 CYP4Z1Q86W10 505 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 SHISA5Q8N114 240 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 OR52E4Q8NGH9 312 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC22A8Q8TCC7 542 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF721Q8TF20 911 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 PYDC1Q8WXC3 89 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 PIK3R3Q92569 461 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 SDCCAG3Q96C92 435 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 C8orf44Q96CB5 159 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 FAM122AQ96E09 287 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 GIMAP5Q96F15 307 aa9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 TREX2Q9BQ50 279 aaPredicted RBP9.54□□□□□ -0.88
PRPF38A-202ENST00000474048 VCX3BQ9H321 246 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms