RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 HRKO00198 91 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 TNFRSF11BO00300 401 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 FCMRO60667 390 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 PRAMEF2O60811 474 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 SOX30O94993 753 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 SNAP29O95721 258 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 RECKO95980 971 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 HBQ1P09105 142 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 ZNF806P0C7X5 589 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 PABPC4LP0CB38 370 aaKnown RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 RHCEP18577 417 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 ZFP36L1Q07352 338 aaKnown RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 LAPTM4AQ15012 233 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 DCST2Q5T1A1 773 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 CCNJQ5T5M9 372 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 FRRS1Q6ZNA5 592 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 BPHLQ86WA6 291 aaPredicted RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 DHRSXQ8N5I4 330 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 AGBL5Q8NDL9 886 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 CHDHQ8NE62 594 aaPredicted RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 VANGL1Q8TAA9 524 aaPredicted RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 APOBEC4Q8WW27 367 aaKnown RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 CYGBQ8WWM9 190 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 TFAP2CQ92754 450 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 TSLPQ969D9 159 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 PINK1Q9BXM7 581 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 MTHFD2LQ9H903 347 aaPredicted RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 FOLH1BQ9HBA9 442 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 PDP1Q9P0J1 537 aaPredicted RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 MKLN1Q9UL63 735 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 SATB2Q9UPW6 733 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 SLC9A8Q9Y2E8 581 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 HEMK1Q9Y5R4 338 aaPredicted RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 VPS13AQ96RL7 3174 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 C17orf105B2RV13 164 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 J3KTA2 159 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 DYRK3O43781 588 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 HS6ST1O60243 411 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 AK1P00568 194 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 ALBP02768 609 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 THRBP10828 461 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 MAP3K8P41279 467 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 EMDP50402 254 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 POU6F2P78424 691 aaPredicted RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 PPP2R2BQ00005 443 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 RHAGQ02094 409 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 FUT7Q11130 342 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 TMEM151BQ8IW70 566 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 BARD1Q99728 777 aaKnown RBP17.66■□□□□ 0.42
SMC4-209ENST00000468653 APMAPQ9HDC9 416 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 SLC13A4Q9UKG4 626 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 MKL2Q9ULH7 1088 aa17.66■□□□□ 0.42
SMC4-209ENST00000468653 IGKV3D-11A0A0A0MRZ8 115 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 A8MUA0 341 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 CDX4O14627 284 aaPredicted RBP17.65■□□□□ 0.42
SMC4-209ENST00000468653 STX11O75558 287 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 NKX2-2O95096 273 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 ZIC2O95409 532 aaPredicted RBP17.65■□□□□ 0.42
SMC4-209ENST00000468653 UBTFL6P0CB48 400 aaPredicted RBP17.65■□□□□ 0.42
SMC4-209ENST00000468653 CDH12P55289 794 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 IL11RAQ14626 422 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 NSDHLQ15738 373 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 ZIK1Q3SY52 487 aaPredicted RBP17.65■□□□□ 0.42
SMC4-209ENST00000468653 NKAIN1Q4KMZ8 207 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 TYW3Q6IPR3 259 aaKnown RBP17.65■□□□□ 0.42
SMC4-209ENST00000468653 CYP4Z1Q86W10 505 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 VRK2Q86Y07 508 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 PEX5LQ8IYB4 626 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 SLC38A9Q8NBW4 561 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 OR52P1PQ8NH57 321 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 HOXB13Q92826 284 aaPredicted RBP17.65■□□□□ 0.42
SMC4-209ENST00000468653 ZG16BQ96DA0 208 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 LMF2Q9BU23 707 aaKnown RBP17.65■□□□□ 0.42
SMC4-209ENST00000468653 ZNF350Q9GZX5 532 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 GABARAPL1Q9H0R8 117 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 OR10A5Q9H207 317 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 CTSFQ9UBX1 484 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 ZNF232Q9UNY5 417 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 IFT52Q9Y366 437 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 ORC6Q9Y5N6 252 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 LYVE1Q9Y5Y7 322 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 CCDC88CQ9P219 2028 aa17.65■□□□□ 0.42
SMC4-209ENST00000468653 ASCC3Q8N3C0 2202 aaKnown RBP17.64■□□□□ 0.41
SMC4-209ENST00000468653 GXYLT2A0PJZ3 443 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 LGI1O95970 557 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 DCDP81605 110 aaKnown RBP17.64■□□□□ 0.41
SMC4-209ENST00000468653 OCA2Q04671 838 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 GANABQ14697 944 aaKnown RBP17.64■□□□□ 0.41
SMC4-209ENST00000468653 GPR68Q15743 365 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 ANKRD34AQ69YU3 496 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 DEF8Q6ZN54 512 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 COX15Q7KZN9 410 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 OR52J3Q8NH60 311 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 PTPMT1Q8WUK0 201 aaPredicted RBP17.64■□□□□ 0.41
SMC4-209ENST00000468653 RDH12Q96NR8 316 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 CTRCQ99895 268 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 VN1R1Q9GZP7 353 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 SLC22A11Q9NSA0 550 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 KIF17Q9P2E2 1029 aa17.64■□□□□ 0.41
SMC4-209ENST00000468653 CLCA3PQ9Y6N3 262 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms