RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 SH3BP4Q9P0V3 963 aa3.26□□□□□ -1.89
TRIM59-202ENST00000468542 KLHL14Q9P2G3 628 aa3.26□□□□□ -1.89
TRIM59-202ENST00000468542 MARCOQ9UEW3 520 aaPredicted RBP3.26□□□□□ -1.89
TRIM59-202ENST00000468542 BAIAP2L1Q9UHR4 511 aa3.26□□□□□ -1.89
TRIM59-202ENST00000468542 BTNL2Q9UIR0 455 aa3.26□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF223Q9UK11 482 aaPredicted RBP3.26□□□□□ -1.89
TRIM59-202ENST00000468542 PRDM4Q9UKN5 801 aa3.26□□□□□ -1.89
TRIM59-202ENST00000468542 TP53TG5Q9Y2B4 290 aa3.26□□□□□ -1.89
TRIM59-202ENST00000468542 GPR55Q9Y2T6 319 aaPredicted RBP3.26□□□□□ -1.89
TRIM59-202ENST00000468542 PCDHGB3Q9Y5G1 929 aa3.26□□□□□ -1.89
TRIM59-202ENST00000468542 GTF3C1Q12789 2109 aa3.26□□□□□ -1.89
TRIM59-202ENST00000468542 BAHCC1Q9P281 2608 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NBPF19A0A087WUL8 3843 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ZGRF1Q86YA3 2104 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ADGRG4Q8IZF6 3080 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NCOA6Q14686 2063 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 A0A1W2PP18 115 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 A0A1W2PRB8 838 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 FAM234BA2RU67 622 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 GMNCA6NCL1 334 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ASPDHA6ND91 283 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 OR6C70A6NIJ9 312 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 DUXAA6NLW8 204 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 BBIP1A8MTZ0 92 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 A8MVJ9 347 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 B8ZZF3 427 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 TP53I11O14683 189 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 CFLARO15519 480 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 EMC8O43402 210 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 SUV39H1O43463 412 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NME2P1O60361 137 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 SHOX2O60902 331 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 DEAF1O75398 565 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ERN1O75460 977 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 SLC25A12O75746 678 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 OR2J2O76002 312 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NEURL1O76050 574 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NKX2-2O95096 273 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 SNX4O95219 450 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NADKO95544 446 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 WDPCPO95876 746 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 AGR2O95994 175 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 AK1P00568 194 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NPPAP01160 153 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 PDGFAP04085 211 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NGFRP08138 427 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ABCB1P08183 1280 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 VIMP08670 466 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 CT62P0C5K7 136 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 CT45A8P0DMV1 189 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 CT45A9P0DMV2 189 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 KITP10721 976 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 LAMP1P11279 417 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NT5EP21589 574 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NME2P22392 152 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ELAVL4P26378 380 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 SSTR4P31391 388 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 LSP1P33241 339 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 S100A3P33764 101 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 PIGAP37287 484 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 CD96P40200 585 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 MC3RP41968 323 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 CD97P48960 835 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 TRPC1P48995 793 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 PRIM2P49643 509 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ANXA11P50995 505 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 PNLIPRP2P54317 469 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 PSMD4P55036 377 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 MANFP55145 182 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 WNT3P56703 355 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 HBA1P69905 142 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 RPP38P78345 283 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ARG2P78540 354 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 MRPS35P82673 323 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 PSG6Q00889 435 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 GUCY1A3Q02108 690 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ID2Q02363 134 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 TUBA3CQ13748 450 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 EFR3AQ14156 821 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 SQLEQ14534 574 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF169Q14929 603 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ZNHIT3Q15649 155 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 NTRK2Q16620 822 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 HYAL4Q2M3T9 481 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF791Q3KP31 576 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 FAM174BQ3ZCQ3 159 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 TRMT12Q53H54 448 aaKnown RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 CT45A2Q5DJT8 189 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 SPANXN4Q5MJ08 99 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 LRIF1Q5T3J3 769 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 HLA-DQA1Q5Y7H0 255 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 SLC6A19Q695T7 634 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 MFSD12Q6NUT3 480 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 TUBA3EQ6PEY2 450 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 BNC2Q6ZN30 1099 aaPredicted RBP3.25□□□□□ -1.89
TRIM59-202ENST00000468542 DGAT2L6Q6ZPD8 337 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 RTL4Q6ZR62 310 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 FAM47EQ6ZV65 393 aa3.25□□□□□ -1.89
TRIM59-202ENST00000468542 MMP21Q8N119 569 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms