RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 KAT8Q9H7Z6 458 aaKnown RBP3.25□□□□□ -1.89
SORT1-202ENST00000466471 AGO3Q9H9G7 860 aaKnown RBP3.25□□□□□ -1.89
SORT1-202ENST00000466471 ZNF556Q9HAH1 456 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 LMAN1LQ9HAT1 526 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 GLOD4Q9HC38 313 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 ACOT13Q9NPJ3 140 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 PXMP2Q9NR77 195 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 DECR2Q9NUI1 292 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 SETD4Q9NVD3 440 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 AIG1Q9NVV5 245 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 OSER1Q9NX31 292 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 ADPRHL2Q9NX46 363 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 ASIC5Q9NY37 505 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 SPG21Q9NZD8 308 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 PTTG3PQ9NZH4 202 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 EIF3KQ9UBQ5 218 aaKnown RBP3.25□□□□□ -1.89
SORT1-202ENST00000466471 PCSK1NQ9UHG2 260 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 EIF2B4Q9UI10 523 aaKnown RBP3.25□□□□□ -1.89
SORT1-202ENST00000466471 LEF1Q9UJU2 399 aaPredicted RBP3.25□□□□□ -1.89
SORT1-202ENST00000466471 ZNF221Q9UK13 617 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 VANGL2Q9ULK5 521 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 STUB1Q9UNE7 303 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 RUVBL2Q9Y230 463 aaKnown RBP3.25□□□□□ -1.89
SORT1-202ENST00000466471 PRELID1Q9Y255 219 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 TNFSF13BQ9Y275 285 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 BTRCQ9Y297 605 aa3.25□□□□□ -1.89
SORT1-202ENST00000466471 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.25□□□□□ -1.89
SORT1-202ENST00000466471 PRRC2CQ9Y520 2896 aaKnown RBP3.25□□□□□ -1.89
SORT1-202ENST00000466471 LRRK1Q38SD2 2015 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 KNL1Q8NG31 2342 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 CCDC187A0A096LP49 1063 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 TRBV5-3A0A0A0MS03 114 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 TEX13CA0A0J9YWL9 993 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 GAGE12BA1L429 117 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 ASPDHA6ND91 283 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 GAGE12HA6NDE8 117 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 MROH6A6NGR9 719 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 NPIPB13A6NJU9 1138 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 NPIPB5A8MRT5 1133 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 A8MT66 165 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 NPIPB4C9JG80 1138 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 H3BMM5 538 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 M0QYT0 321 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 M0R3G1 203 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 UBFD1O14562 309 aaKnown RBP3.24□□□□□ -1.89
SORT1-202ENST00000466471 PRMT5O14744 637 aaPredicted RBP3.24□□□□□ -1.89
SORT1-202ENST00000466471 DSCR3O14972 297 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 ANKRD28O15084 1053 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 RAD51BO15315 384 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 B4GAT1O43505 415 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 ZNF623O75123 536 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 SLC22A3O75751 556 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 CCNKO75909 580 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 PGLSO95336 258 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 SEC24AO95486 1093 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 NADKO95544 446 aaPredicted RBP3.24□□□□□ -1.89
SORT1-202ENST00000466471 CXCL14O95715 111 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 TSPAN12O95859 305 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 TNNC2P02585 160 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 APOA1P02647 267 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 FTH1P02794 183 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 SEMG1P04279 462 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 EDN1P05305 212 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 FYNP06241 537 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 ODC1P11926 461 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 ARSAP15289 507 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 ZNF37AP17032 561 aaPredicted RBP3.24□□□□□ -1.89
SORT1-202ENST00000466471 TMEM11P17152 192 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 HOXB9P17482 250 aaPredicted RBP3.24□□□□□ -1.89
SORT1-202ENST00000466471 CYP2A7P20853 494 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 PRKACBP22694 351 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 IL32P24001 234 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 GKP32189 559 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 TALDO1P37837 337 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 DCTP40126 519 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 PBX3P40426 434 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 HNF4AP41235 474 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 MATKP42679 507 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 OR3A3P47888 321 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 LIMS1P48059 325 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 GZMMP51124 257 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 IST1P53990 364 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 PNLIPRP2P54317 469 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 SLURP1P55000 103 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 TMPRSS3P57727 454 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 TAS2R39P59534 338 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 RPS6P62753 249 aaKnown RBP3.24□□□□□ -1.89
SORT1-202ENST00000466471 HERVK_113P63132 956 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 LIPEQ05469 1076 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 EFEMP1Q12805 493 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 RALGDSQ12967 914 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 SLC14A1Q13336 389 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 ASAH1Q13510 395 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 OLIG2Q13516 323 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 MXD4Q14582 209 aaPredicted RBP3.24□□□□□ -1.89
SORT1-202ENST00000466471 MFSD13AQ14CX5 517 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 EMC2Q15006 297 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 MED22Q15528 200 aa3.24□□□□□ -1.89
SORT1-202ENST00000466471 ELAVL1Q15717 326 aaKnown RBP3.24□□□□□ -1.89
SORT1-202ENST00000466471 NEDD8Q15843 81 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms