RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 HOXC5Q00444 222 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 MADCAM1Q13477 382 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 GNA13Q14344 377 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 KRT33BQ14525 404 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 LSRQ86X29 649 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-212ENST00000466410 ANKK1Q8NFD2 765 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 OR2L8Q8NGY9 312 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 ARMC5Q96C12 935 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 FAM46AQ96IP4 442 aaKnown RBP18.18■□□□□ 0.5
LIMS2-212ENST00000466410 KCTD7Q96MP8 289 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 POLMQ9NP87 494 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-212ENST00000466410 CES1P1Q9UKY3 287 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 ENTPD4Q9Y227 616 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 GRIP1Q9Y3R0 1128 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 CHST2Q9Y4C5 530 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 TMEM129A0AVI4 362 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 UBXN7O94888 489 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 TRIM23P36406 574 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 DMPKQ09013 629 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 CRTC2Q53ET0 693 aaPredicted RBP18.17■□□□□ 0.5
LIMS2-212ENST00000466410 ATAD3CQ5T2N8 411 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 ZFP41Q8N8Y5 198 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 OR56A1Q8NGH5 318 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 OR52E1Q8NGJ3 308 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 GNPDA2Q8TDQ7 276 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 SMARCD2Q92925 531 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 MCOLN1Q9GZU1 580 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 ZNF221Q9UK13 617 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 SCN3AQ9NY46 2000 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 STK25O00506 426 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 TFECO14948 347 aaPredicted RBP18.17■□□□□ 0.5
LIMS2-212ENST00000466410 LIMS3P0CW19 117 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 LIMS4P0CW20 117 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 SLC9A3P48764 834 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 DAB2P98082 770 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 TPBGQ13641 420 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 MINDY4Q4G0A6 757 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 SLC48A1Q6P1K1 146 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 FBXO46Q6PJ61 603 aaPredicted RBP18.17■□□□□ 0.5
LIMS2-212ENST00000466410 ZNF730Q6ZMV8 503 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 MRGPREQ86SM8 312 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 FAM181AQ8N9Y4 354 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 OR2L5Q8NG80 312 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 OR9A2Q8NGT5 310 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 DIRAS2Q96HU8 199 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 KATNB1Q9BVA0 655 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 SPHK1Q9NYA1 384 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 NTNG1Q9Y2I2 539 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 N6AMT1Q9Y5N5 214 aa18.17■□□□□ 0.5
LIMS2-212ENST00000466410 ATG2BQ96BY7 2078 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 LINC01553A4QN01 128 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 PRR23AA6NEV1 266 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 FABP12A6NFH5 140 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 CH25HO95992 272 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 CSNK2A2P19784 350 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-212ENST00000466410 TRHRP34981 398 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-212ENST00000466410 CAV3P56539 151 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 TSPAN31Q12999 210 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 LHFPL3Q86UP9 236 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 GATAD2AQ86YP4 633 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 RAB43Q86YS6 212 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 TMEM145Q8NBT3 493 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 NUP43Q8NFH3 380 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 DIO2Q92813 273 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 FGF13Q92913 245 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 MMP28Q9H239 520 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 ZFR2Q9UPR6 939 aaKnown RBP18.16■□□□□ 0.5
LIMS2-212ENST00000466410 F3P13726 295 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 FABP5Q01469 135 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 SCN1BQ07699 218 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 TRAM2Q15035 370 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 PDGFRLQ15198 375 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 LTB4RQ15722 352 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 CST6Q15828 149 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 CAMKK1Q8N5S9 505 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 ZNF513Q8N8E2 541 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-212ENST00000466410 JPH3Q8WXH2 748 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-212ENST00000466410 KAT2AQ92830 837 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 BADQ92934 168 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 ARHGDIGQ99819 225 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 MOSPD1Q9UJG1 213 aa18.16■□□□□ 0.5
LIMS2-212ENST00000466410 RANBP2P49792 3224 aaKnown RBP18.15■□□□□ 0.5
LIMS2-212ENST00000466410 A8MV72 311 aaPredicted RBP18.15■□□□□ 0.5
LIMS2-212ENST00000466410 SLC30A4O14863 429 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 EMC8O43402 210 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 PRICKLE3O43900 615 aaPredicted RBP18.15■□□□□ 0.5
LIMS2-212ENST00000466410 ALPPP05187 535 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 CSF3P09919 207 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 TCEA1P23193 301 aaKnown RBP18.15■□□□□ 0.5
LIMS2-212ENST00000466410 PEBP1P30086 187 aaKnown RBP18.15■□□□□ 0.5
LIMS2-212ENST00000466410 SOX18P35713 384 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 AVPR1BP47901 424 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 PRR5P85299 388 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 TGM3Q08188 693 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 SLC30A6Q6NXT4 461 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 QSOX2Q6ZRP7 698 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 HDDC3Q8N4P3 179 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 OR2L3Q8NG85 312 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 OR52P1PQ8NH57 321 aa18.15■□□□□ 0.5
LIMS2-212ENST00000466410 ELP4Q96EB1 424 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms