RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 LRRN3Q9H3W5 708 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 RHCGQ9UBD6 479 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 DAPP1Q9UN19 280 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 PCDHGB2Q9Y5G2 931 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 PGRMC2O15173 223 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 TOX3O15405 576 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SLC28A2O43868 658 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 GALR3O60755 368 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 MRPS14O60783 128 aaKnown RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 DNAJB6O75190 326 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 FADS2O95864 444 aaKnown RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 NR4A1P22736 598 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 PTGER1P34995 402 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 GPC1P35052 558 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 OLR1P78380 273 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 DUSP2Q05923 314 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 RUNX2Q13950 521 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SPCS2Q15005 226 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SF3A2Q15428 464 aaKnown RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SYPL1Q16563 259 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 TCTE1Q5JU00 501 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 CCDC81Q6ZN84 652 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 PRSS48Q7RTY5 328 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 KMT5CQ86Y97 462 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 CCDC103Q8IW40 242 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SVOPQ8N4V2 548 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SUMF1Q8NBK3 374 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 OR5D16Q8NGK9 328 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 PHF10Q8WUB8 498 aaKnown RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 IPCEF1Q8WWN9 437 aaPredicted RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 KLHL6Q8WZ60 621 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SLC41A2Q96JW4 573 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 BBS4Q96RK4 519 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF768Q9H5H4 540 aaKnown RBP13.6□□□□□ -0.23
COL5A1-205ENST00000464187 SYNDIG1Q9H7V2 258 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 KCMF1Q9P0J7 381 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 P2RX2Q9UBL9 471 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 HCN4Q9Y3Q4 1203 aa13.6□□□□□ -0.23
COL5A1-205ENST00000464187 ARRDC5A6NEK1 342 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 BCL10O95999 233 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF806P0C7X5 589 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 CALRP27797 417 aaKnown RBP13.59□□□□□ -0.23
COL5A1-205ENST00000464187 BUD31P41223 144 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-205ENST00000464187 KCNJ5P48544 419 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 CTF1Q16619 201 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF750Q32MQ0 723 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 SYT6Q5T7P8 510 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF770Q6IQ21 691 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-205ENST00000464187 AHSA2Q719I0 299 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 AQP11Q8NBQ7 271 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 OR4D9Q8NGE8 314 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 OR4D11Q8NGI4 311 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 SUN3Q8TAQ9 357 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 PROX1Q92786 737 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 GTPBP3Q969Y2 492 aaKnown RBP13.59□□□□□ -0.23
COL5A1-205ENST00000464187 YIPF6Q96EC8 236 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 C10orf90Q96M02 699 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ALPK1Q96QP1 1244 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 SPRTNQ9H040 489 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF556Q9HAH1 456 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 NMNAT1Q9HAN9 279 aaPredicted RBP13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ANKHQ9HCJ1 492 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ACOT13Q9NPJ3 140 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ZCCHC3Q9NUD5 404 aaKnown RBP13.59□□□□□ -0.23
COL5A1-205ENST00000464187 MS4A12Q9NXJ0 267 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF226Q9NYT6 803 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 PHF11Q9UIL8 331 aa13.59□□□□□ -0.23
COL5A1-205ENST00000464187 TRBV4-1A0A0J9YWV2 114 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 HYKKA2RU49 373 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 TMEM150CB9EJG8 249 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 FAM227AF5H4B4 570 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 SGK494L7N484 410 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 CDX4O14627 284 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-205ENST00000464187 FLRT2O43155 660 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 SEMA7AO75326 666 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 BCAS1O75363 584 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-205ENST00000464187 ERAL1O75616 437 aaKnown RBP13.58□□□□□ -0.24
COL5A1-205ENST00000464187 GABARAPO95166 117 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 MED26O95402 600 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 NR2F6P10588 404 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 POU2F1P14859 743 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 FOLR1P15328 257 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 CPN2P22792 545 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 KHKP50053 298 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 TNFRSF17Q02223 184 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 MVKQ03426 396 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 GPR19Q15760 415 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 NDUFA9Q16795 377 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 INAVAQ3KP66 663 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 COLEC12Q5KU26 742 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 GARNL3Q5VVW2 1013 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 SLC48A1Q6P1K1 146 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 TMEM64Q6YI46 380 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 P3H2Q8IVL5 708 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 TAGAPQ8N103 731 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 PARP8Q8N3A8 854 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 OR5T3Q8NGG3 340 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 OR9A4Q8NGU2 314 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 RHOXF1Q8NHV9 184 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 SFXN5Q8TD22 340 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms