RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 ZNF808Q8N4W9 903 aaPredicted RBP11.87□□□□□ -0.51
XRN1-203ENST00000463916 ZNF597Q96LX8 424 aa11.87□□□□□ -0.51
XRN1-203ENST00000463916 ADOQ96SZ5 270 aa11.87□□□□□ -0.51
XRN1-203ENST00000463916 SORT1Q99523 831 aa11.87□□□□□ -0.51
XRN1-203ENST00000463916 C1orf50Q9BV19 199 aa11.87□□□□□ -0.51
XRN1-203ENST00000463916 LDAHQ9H6V9 325 aa11.87□□□□□ -0.51
XRN1-203ENST00000463916 SH3BP4Q9P0V3 963 aa11.87□□□□□ -0.51
XRN1-203ENST00000463916 NOTCH2Q04721 2471 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 TACC2O95359 2948 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 TRGV5A0A0B4J1U4 118 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 AQP7O14520 342 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 TSPAN2O60636 221 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 REM1O75628 298 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 HSPA4LO95757 839 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 SERPINE1P05121 402 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 BGNP21810 368 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 MAN2A2P49641 1150 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 ABCE1P61221 599 aaKnown RBP11.86□□□□□ -0.51
XRN1-203ENST00000463916 HSPB3Q12988 150 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 ART3Q13508 389 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 PACS2Q86VP3 889 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 SLC44A2Q8IWA5 706 aaPredicted RBP11.86□□□□□ -0.51
XRN1-203ENST00000463916 LIX1Q8N485 282 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 PPP1R14CQ8TAE6 165 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 PPCDCQ96CD2 204 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 PPP3R2Q96LZ3 170 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 COL21A1Q96P44 957 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 STMN4Q9H169 189 aaPredicted RBP11.86□□□□□ -0.51
XRN1-203ENST00000463916 METTL7AQ9H8H3 244 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 ACKR4Q9NPB9 350 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 CSMD1Q96PZ7 3565 aa11.86□□□□□ -0.51
XRN1-203ENST00000463916 OR14I1A6ND48 311 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 OR6C70A6NIJ9 312 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 C17orf51A8MQB3 221 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 B4DXG7 233 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 PRSS44E7EML9 344 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 GNB5O14775 395 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 PDPK1O15530 556 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 TBX19O60806 448 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 ZWINTO95229 277 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 GDF1P27539 372 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 FRKP42685 505 aaPredicted RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 MASP1P48740 699 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 WDR4P57081 412 aaKnown RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 TIGD3Q6B0B8 471 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 SP5Q6BEB4 398 aaPredicted RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 RTL6Q6ICC9 239 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 TMEM81Q6P7N7 255 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 XKRXQ6PP77 449 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 OR7A2PQ8NGA2 310 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 EFHD2Q96C19 240 aaPredicted RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 SLC35A4Q96G79 324 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 ZNF764Q96H86 408 aaPredicted RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 PPP1R36Q96LQ0 422 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 DDX18Q9NVP1 670 aaKnown RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 HCN1O60741 890 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 TRAPPC6AO75865 159 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 SLITRK5O94991 958 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 SLC1A6P48664 564 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 CDK9P50750 372 aaKnown RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 ZNF155Q12901 538 aaPredicted RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 GAB1Q13480 694 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 PDCD2Q16342 344 aaPredicted RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 ATP6AP1LQ52LC2 224 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 IL23RQ5VWK5 629 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 ZNF585AQ6P3V2 769 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 ANGPTL8Q6UXH0 198 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 ANKRD42Q8N9B4 389 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 WDSUB1Q8N9V3 476 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 FNDC5Q8NAU1 212 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 NEIL3Q8TAT5 605 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 PHF10Q8WUB8 498 aaKnown RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 TUBGCP3Q96CW5 907 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 TMEM41AQ96HV5 264 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 TP63Q9H3D4 680 aaPredicted RBP11.85□□□□□ -0.51
XRN1-203ENST00000463916 QPCTLQ9NXS2 382 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 ACAD8Q9UKU7 415 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 C15orf41Q9Y2V0 281 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 FAM215AQ9Y5M1 114 aa11.85□□□□□ -0.51
XRN1-203ENST00000463916 TMEM114B3SHH9 223 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 COQ9O75208 318 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 LAMP1P11279 417 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 HTR1EP28566 365 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 PTPN6P29350 595 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 ASMTP46597 345 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 SMSP52788 366 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 RPP38P78345 283 aaKnown RBP11.84□□□□□ -0.51
XRN1-203ENST00000463916 PMPCAQ10713 525 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 LARP4Q71RC2 724 aaKnown RBP eCLIP11.84□□□□□ -0.51
XRN1-203ENST00000463916 CROCCP2Q86T23 111 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 KRTCAP2Q8N6L1 136 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 PAIP2Q9BPZ3 127 aaKnown RBP11.84□□□□□ -0.51
XRN1-203ENST00000463916 OSBPL11Q9BXB4 747 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 EXO5Q9H790 373 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 KLRF1Q9NZS2 232 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 FLRT3Q9NZU0 649 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 B4GALT7Q9UBV7 327 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 OR10H1Q9Y4A9 318 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 MED12Q93074 2177 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 APCP25054 2843 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms