RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 BNIP3Q12983 259 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 DUSP8Q13202 625 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 KCNAB1Q14722 419 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 ATAD3BQ5T9A4 648 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 TYW3Q6IPR3 259 aaKnown RBP11.97□□□□□ -0.49
VAPB-203ENST00000463370 PARP8Q8N3A8 854 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 RHOXF1Q8NHV9 184 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 FAR1Q8WVX9 515 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 MUL1Q969V5 352 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 TUBA1CQ9BQE3 449 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 DCUN1D5Q9BTE7 237 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 SPATA5L1Q9BVQ7 753 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 PRDM9Q9NQV7 894 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 TMCC3Q9ULS5 477 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 LIPT1Q9Y234 373 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 SLC9A8Q9Y2E8 581 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 TMEM184BQ9Y519 407 aaPredicted RBP11.97□□□□□ -0.49
VAPB-203ENST00000463370 RNF215Q9Y6U7 377 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 SPACA6W5XKT8 324 aa11.97□□□□□ -0.49
VAPB-203ENST00000463370 WDR87Q6ZQQ6 2873 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 CCDC88CQ9P219 2028 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 HRKO00198 91 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 ZBTB11O95625 1053 aaPredicted RBP11.96□□□□□ -0.49
VAPB-203ENST00000463370 AVPR1BP47901 424 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 C14orf28Q4W4Y0 310 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 PRAMEF8Q5VWM4 474 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 PRAMEF7Q5VXH5 474 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 KLHL35Q6PF15 583 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 AHSA2Q719I0 299 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 OR52P1PQ8NH57 321 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 TANKQ92844 425 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 TCTN2Q96GX1 697 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 PEX11GQ96HA9 241 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 SPACA7Q96KW9 195 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 DOK1Q99704 481 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 UCK1Q9HA47 277 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 SELENONQ9NZV5 590 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
VAPB-203ENST00000463370 SPAG17Q6Q759 2223 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 NPIPA5A0A0B4J1W7 369 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 A0A1B0GVT2 93 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 A0A1W2PRQ8 180 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 NPIPA7E9PJI5 369 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 FAAHO00519 579 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 NPIPA8P0DM63 369 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 CRISP1P54107 249 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 OR1D5P58170 312 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 TARDBPQ13148 414 aaKnown RBP eCLIP11.96□□□□□ -0.5
VAPB-203ENST00000463370 DGCR6Q14129 220 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 MAPK14Q16539 360 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 EXOSC6Q5RKV6 272 aaKnown RBP11.96□□□□□ -0.5
VAPB-203ENST00000463370 OGFOD3Q6PK18 319 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 ZER1Q7Z7L7 766 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 SLC25A45Q8N413 288 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 MORN4Q8NDC4 146 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 DNASE2BQ8WZ79 361 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 SCN2AQ99250 2005 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 SDF2Q99470 211 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 ARHGDIGQ99819 225 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 FNDC11Q9BVV2 318 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 SPRTNQ9H040 489 aaPredicted RBP11.96□□□□□ -0.5
VAPB-203ENST00000463370 C11orf16Q9NQ32 467 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 TPRKBQ9Y3C4 175 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 SIT1Q9Y3P8 196 aa11.96□□□□□ -0.5
VAPB-203ENST00000463370 CFAP54Q96N23 3096 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 DUXAA6NLW8 204 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 CPSF4LA6NMK7 179 aaKnown RBP11.95□□□□□ -0.5
VAPB-203ENST00000463370 ZAR1LA6NP61 321 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 PLOD3O60568 738 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 FADS2O95864 444 aaKnown RBP11.95□□□□□ -0.5
VAPB-203ENST00000463370 ADAP00813 363 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 TP53P04637 393 aaPredicted RBP11.95□□□□□ -0.5
VAPB-203ENST00000463370 ITIH1P19827 911 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 NR4A1P22736 598 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 C21orf33P30042 268 aaPredicted RBP11.95□□□□□ -0.5
VAPB-203ENST00000463370 CNR2P34972 360 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 CTSKP43235 329 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 GPR68Q15743 365 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 ARHGAP11BQ3KRB8 267 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 PUS10Q3MIT2 529 aaKnown RBP11.95□□□□□ -0.5
VAPB-203ENST00000463370 ZC3H14Q6PJT7 736 aaKnown RBP11.95□□□□□ -0.5
VAPB-203ENST00000463370 CTHRC1Q96CG8 243 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 ARSGQ96EG1 525 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 PRRC1Q96M27 445 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 SIGLEC11Q96RL6 698 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.95□□□□□ -0.5
VAPB-203ENST00000463370 UCK2Q9BZX2 261 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 CAPN10Q9HC96 672 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 VCX3AQ9NNX9 186 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 SEMA4GQ9NTN9 838 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 SOHLH2Q9NX45 425 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 SCN3BQ9NY72 215 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 TMEM9Q9P0T7 183 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 LRIT1Q9P2V4 623 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 KCNE5Q9UJ90 142 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 WDR45Q9Y484 360 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 CLDN16Q9Y5I7 305 aa11.95□□□□□ -0.5
VAPB-203ENST00000463370 A0A1W2PPW3 197 aa11.94□□□□□ -0.5
VAPB-203ENST00000463370 GXYLT2A0PJZ3 443 aa11.94□□□□□ -0.5
VAPB-203ENST00000463370 BCAT2O15382 392 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms