RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 OR2T11Q8NH01 316 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TCP10LQ8TDR4 215 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TWIST2Q8WVJ9 160 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TMCO6Q96DC7 493 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 SLC35A4Q96G79 324 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 FCRL1Q96LA6 429 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 COL21A1Q96P44 957 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 GNRHR2Q96P88 292 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 CCT7Q99832 543 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TTYH2Q9BSA4 534 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TRIM8Q9BZR9 551 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 ROPN1BQ9BZX4 212 aaPredicted RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 ROPN1Q9HAT0 212 aaPredicted RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 DDX18Q9NVP1 670 aaKnown RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 TAS2R9Q9NYW1 312 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 MAPRE3Q9UPY8 281 aa9.3□□□□□ -0.92
SF3A3-204ENST00000462258 EXO1Q9UQ84 846 aaKnown RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 WBP11Q9Y2W2 641 aaKnown RBP9.3□□□□□ -0.92
SF3A3-204ENST00000462258 DCHS2Q6V1P9 2916 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 A0A087WV62 115 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 NKX2-6A6NCS4 301 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 HAX1O00165 279 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 LSM1O15116 133 aaKnown RBP9.29□□□□□ -0.92
SF3A3-204ENST00000462258 PDPK1O15530 556 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 REM1O75628 298 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 GLI4P10075 376 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 SDC1P18827 310 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 KIR3DL1P43629 444 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 SNTA1Q13424 505 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 EFR3AQ14156 821 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 KRT71Q3SY84 523 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 GALNTL6Q49A17 601 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 SH2D4BQ5SQS7 431 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 DDIASQ8IXT1 998 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 ULK2Q8IYT8 1036 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 OR10Q1Q8NGQ4 319 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 AGR3Q8TD06 166 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 GFM2Q969S9 779 aaKnown RBP9.29□□□□□ -0.92
SF3A3-204ENST00000462258 NTNG2Q96CW9 530 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 ZNF764Q96H86 408 aaPredicted RBP9.29□□□□□ -0.92
SF3A3-204ENST00000462258 EGLN2Q96KS0 407 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 AMDHD1Q96NU7 426 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 TSSK3Q96PN8 268 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 ADOQ96SZ5 270 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 TUBB1Q9H4B7 451 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 GLIPR2Q9H4G4 154 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 EML4Q9HC35 981 aaKnown RBP9.29□□□□□ -0.92
SF3A3-204ENST00000462258 ALKBH4Q9NXW9 302 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 TAS2R7Q9NYW3 318 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 TMED5Q9Y3A6 229 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 OR10H1Q9Y4A9 318 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 PCDHGB3Q9Y5G1 929 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 DNAJC15Q9Y5T4 150 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 WIF1Q9Y5W5 379 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 KIAA1549Q9HCM3 1950 aa9.29□□□□□ -0.92
SF3A3-204ENST00000462258 INTS1Q8N201 2190 aaKnown RBP9.29□□□□□ -0.92
SF3A3-204ENST00000462258 A0A0G2JNJ9 132 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 FAM47E-STBD1D6RA91 191 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 PLOD2O00469 737 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 PIP5K1BO14986 540 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 TSPAN2O60636 221 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ICOSLGO75144 302 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 PSMG1O95456 288 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 HOXD4P09016 255 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 LINC00032P0C843 101 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 CREB1P16220 341 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 MSX1P28360 303 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 SERPINB5P36952 375 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ADH7P40394 386 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ZFP36L2P47974 494 aaKnown RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 PSG6Q00889 435 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 TFF3Q07654 80 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ZNF844Q08AG5 666 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 HSPB3Q12988 150 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ACSF3Q4G176 576 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 EIPR1Q53HC9 387 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ARL13AQ5H913 290 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 NHSL2Q5HYW2 709 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 WIPI1Q5MNZ9 446 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 DCST1Q5T197 706 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 RIPPLY2Q5TAB7 128 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ANKRD26P1Q6NSI1 321 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 MEX3BQ6ZN04 569 aaKnown RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 Q6ZSR9 355 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 LARP4Q71RC2 724 aaKnown RBP eCLIP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 SLC44A2Q8IWA5 706 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 PM20D2Q8IYS1 436 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 OR2L13Q8N349 312 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 ACBD4Q8NC06 268 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 FAM83FQ8NEG4 500 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 OR4N2Q8NGD1 307 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 LILRB4Q8NHJ6 448 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 CLHC1Q8NHS4 586 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 EFHD2Q96C19 240 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-204ENST00000462258 PPCDCQ96CD2 204 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 SPOCK3Q9BQ16 436 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 TMEM109Q9BVC6 243 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 UGT2B28Q9BY64 529 aa9.28□□□□□ -0.92
SF3A3-204ENST00000462258 UCK2Q9BZX2 261 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms