RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 EXO5Q9H790 373 aa20.61■□□□□ 0.89
TRAF4-207ENST00000461195 ZNF395Q9H8N7 513 aaPredicted RBP20.61■□□□□ 0.89
TRAF4-207ENST00000461195 SH3BP4Q9P0V3 963 aa20.61■□□□□ 0.89
TRAF4-207ENST00000461195 NCOA6Q14686 2063 aaPredicted RBP20.61■□□□□ 0.89
TRAF4-207ENST00000461195 TRGV5A0A0B4J1U4 118 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 OR6C70A6NIJ9 312 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 UPK1AO00322 258 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 AQP7O14520 342 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 ADAM10O14672 748 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 BCKDKO14874 412 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 ABCB7O75027 752 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 REM1O75628 298 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 DDX5P17844 614 aaKnown RBP20.6■□□□□ 0.89
TRAF4-207ENST00000461195 GDF1P27539 372 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 KRT20P35900 424 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 SLC1A6P48664 564 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 HSPB3Q12988 150 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 SNTA1Q13424 505 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 ZNF385BQ569K4 471 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 C6orf136Q5SQH8 315 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 DESI1Q6ICB0 168 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 XKRXQ6PP77 449 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 ZNF551Q7Z340 670 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-207ENST00000461195 SLC44A2Q8IWA5 706 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-207ENST00000461195 LIX1Q8N485 282 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 ZNF781Q8N8C0 355 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 FNDC5Q8NAU1 212 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 CIDECQ96AQ7 238 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-207ENST00000461195 TUBGCP3Q96CW5 907 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 NTNG2Q96CW9 530 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 ZBED6CLQ96FA7 236 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-207ENST00000461195 TMEM41AQ96HV5 264 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 NODALQ96S42 347 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 DMRTA2Q96SC8 542 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 PAIP2Q9BPZ3 127 aaKnown RBP20.6■□□□□ 0.89
TRAF4-207ENST00000461195 TP63Q9H3D4 680 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-207ENST00000461195 ACKR4Q9NPB9 350 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.6■□□□□ 0.89
TRAF4-207ENST00000461195 RAP2CQ9Y3L5 183 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 CELSR2Q9HCU4 2923 aa20.6■□□□□ 0.89
TRAF4-207ENST00000461195 PSMG1O95456 288 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 AGAP20933 346 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 BGNP21810 368 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 COL8A1P27658 744 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 IL12BP29460 328 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 GPC1P35052 558 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 HPCAL1P37235 193 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 RPL3P39023 403 aaKnown RBP20.59■□□□□ 0.89
TRAF4-207ENST00000461195 ART3Q13508 389 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 HHATQ5VTY9 493 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 SLC30A6Q6NXT4 461 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 ANKRD42Q8N9B4 389 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 TMCO6Q96DC7 493 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 SLC35A4Q96G79 324 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 C1orf50Q9BV19 199 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 OSBPL11Q9BXB4 747 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 C20orf27Q9GZN8 174 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 KLRF1Q9NZS2 232 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 OR10H1Q9Y4A9 318 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 HRH3Q9Y5N1 445 aa20.59■□□□□ 0.89
TRAF4-207ENST00000461195 PCNX1Q96RV3 2341 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 PRAMEF25A6NGN4 478 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 TSPAN2O60636 221 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 PRPS2P11908 318 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 ELAVL4P26378 380 aaKnown RBP20.58■□□□□ 0.89
TRAF4-207ENST00000461195 FRKP42685 505 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-207ENST00000461195 MANFP55145 182 aaKnown RBP20.58■□□□□ 0.89
TRAF4-207ENST00000461195 PSG6Q00889 435 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 STX3Q13277 289 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 EFR3AQ14156 821 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 PDCD2Q16342 344 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-207ENST00000461195 GXYLT1Q4G148 440 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 EMC4Q5J8M3 183 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 FNDC7Q5VTL7 733 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 IL23RQ5VWK5 629 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 NCCRP1Q6ZVX7 275 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-207ENST00000461195 LARP4Q71RC2 724 aaKnown RBP eCLIP20.58■□□□□ 0.893e-6■■□□□ 13
TRAF4-207ENST00000461195 KIRREL3Q8IZU9 778 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 SARAFQ96BY9 339 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 GNRHR2Q96P88 292 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 ADOQ96SZ5 270 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 PNPLA3Q9NST1 481 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 ACSS1Q9NUB1 689 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-207ENST00000461195 ATP6V1HQ9UI12 483 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 C15orf41Q9Y2V0 281 aa20.58■□□□□ 0.89
TRAF4-207ENST00000461195 FREM3P0C091 2139 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 TMEM120BA0PK00 339 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 SCAMP2O15127 329 aaKnown RBP20.57■□□□□ 0.88
TRAF4-207ENST00000461195 ICOSLGO75144 302 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 PTGDSP41222 190 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 RPL14P50914 215 aaKnown RBP20.57■□□□□ 0.88
TRAF4-207ENST00000461195 PNLIPRP2P54317 469 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 MRPS22P82650 360 aaKnown RBP20.57■□□□□ 0.88
TRAF4-207ENST00000461195 MAD2L1Q13257 205 aaPredicted RBP20.57■□□□□ 0.88
TRAF4-207ENST00000461195 ZNHIT3Q15649 155 aaPredicted RBP20.57■□□□□ 0.88
TRAF4-207ENST00000461195 TIGD3Q6B0B8 471 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 TMEM211Q6ICI0 200 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 ANGPTL8Q6UXH0 198 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 OR4N2Q8NGD1 307 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 OR5M9Q8NGP3 310 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms