RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CASKO14936 926 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 HCRTR2O43614 444 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 PDYNP01213 254 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 CRHP06850 196 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 INHBAP08476 426 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 COL6A2P12110 1019 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 HSD3B1P14060 373 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 ZNF708P17019 499 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 HSD3B2P26439 372 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 KRT20P35900 424 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 LHX2P50458 406 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 EFR3AQ14156 821 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 TRADDQ15628 312 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 DESI1Q6ICB0 168 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 OR2A2Q6IF42 318 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 KRTAP1-3Q8IUG1 177 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 RELL1Q8IUW5 271 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 GRAMD2AQ8IUY3 354 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 TRIM42Q8IWZ5 723 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 GCNT2Q8N0V5 402 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 ADCY4Q8NFM4 1077 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 ZNF483Q8TF39 744 aaPredicted RBP9.88□□□□□ -0.83
USP1-204ENST00000452143 RNF138Q8WVD3 245 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 SLC44A1Q8WWI5 657 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 SELENOMQ8WWX9 145 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 TMBIM1Q969X1 311 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 INTS12Q96CB8 462 aaKnown RBP9.88□□□□□ -0.83
USP1-204ENST00000452143 TM4SF18Q96CE8 201 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 CNRIP1Q96F85 164 aaPredicted RBP9.88□□□□□ -0.83
USP1-204ENST00000452143 ZNF681Q96N22 645 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 SFXN2Q96NB2 322 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 MRPL57Q9BQC6 102 aaKnown RBP9.88□□□□□ -0.83
USP1-204ENST00000452143 SHCBP1LQ9BZQ2 653 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 MRPL46Q9H2W6 279 aaKnown RBP9.88□□□□□ -0.83
USP1-204ENST00000452143 ZDHHC18Q9NUE0 388 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 EHD3Q9NZN3 535 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 NDRG3Q9UGV2 375 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 UTS2RQ9UKP6 389 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 EIF3LQ9Y262 564 aaKnown RBP9.88□□□□□ -0.83
USP1-204ENST00000452143 GPR55Q9Y2T6 319 aaPredicted RBP9.88□□□□□ -0.83
USP1-204ENST00000452143 FBN3Q75N90 2809 aa9.88□□□□□ -0.83
USP1-204ENST00000452143 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 ESYT3A0FGR9 886 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 PLOD2O00469 737 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 MSTNO14793 375 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 TNFSF13O75888 250 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 INHBBP09529 407 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 PCSK2P16519 638 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 ADSLP30566 484 aaPredicted RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 CASQ1P31415 396 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 CPOXP36551 454 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 ALDH9A1P49189 494 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 SERPINB9P50453 376 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 CLDN18P56856 261 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 NKX6-1P78426 367 aaPredicted RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 MRPS22P82650 360 aaKnown RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 MRPS35P82673 323 aaKnown RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 SRYQ05066 204 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 DUSP2Q05923 314 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 LTBQ06643 244 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 CSTF3Q12996 717 aaKnown RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 LTB4RQ15722 352 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 BCL2A1Q16548 175 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 ERCC6LQ2NKX8 1250 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 TRMT12Q53H54 448 aaKnown RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 ZNF628Q5EBL2 1059 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 SGO1Q5FBB7 561 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 C8orf74Q6P047 294 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 LETMD1Q6P1Q0 360 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 LRRC75A-AS1Q8N1F1 130 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 C1orf52Q8N6N3 182 aaKnown RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 SIMC1Q8NDZ2 872 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 ANP32BQ92688 251 aaKnown RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 VSTM2LQ96N03 204 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 PAFAH2Q99487 392 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 PIP5K1AQ99755 562 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 TSPYL1Q9H0U9 437 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 FARSBQ9NSD9 589 aaKnown RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 NINJ2Q9NZG7 142 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 VPS29Q9UBQ0 182 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 MCM8Q9UJA3 840 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 DKKL1Q9UK85 242 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 TESMINQ9Y4I5 508 aa9.87□□□□□ -0.83
USP1-204ENST00000452143 RAI1Q7Z5J4 1906 aaPredicted RBP9.87□□□□□ -0.83
USP1-204ENST00000452143 HIVEP2P31629 2446 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 A0A1B0GTL3 188 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 A0A1W2PNV4 684 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 A0A1W2PPR1 153 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 A8MT66 165 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 ARHGEF9O43307 516 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 TSPAN2O60636 221 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 REM1O75628 298 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 KRT6AP02538 564 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 KRT6BP04259 564 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 HEXAP06865 529 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 CT45A8P0DMV1 189 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 CT45A9P0DMV2 189 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 IL12BP29460 328 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 GSTM5P46439 218 aa9.86□□□□□ -0.83
USP1-204ENST00000452143 KRT6CP48668 564 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms