RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ROGDIQ9GZN7 287 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 GALNT9Q9HCQ5 603 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 SYBUQ9NX95 663 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 KLRF1Q9NZS2 232 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 TMEFF2Q9UIK5 374 aaPredicted RBP11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 EMC9Q9Y3B6 208 aa11.25□□□□□ -0.61
AC004540.1-204ENST00000449537 GOLGA8MH3BSY2 632 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 TBX6O95947 436 aaPredicted RBP11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 NAGAP17050 411 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 PSMB1P20618 241 aaKnown RBP11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 ABCD3P28288 659 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 PHBP35232 272 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 PTGDSP41222 190 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 KCNC1P48547 511 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 MRPS25P82663 173 aaKnown RBP11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 BSPH1Q075Z2 132 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 PDIA2Q13087 525 aaKnown RBP11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 THOC5Q13769 683 aaKnown RBP11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 PON3Q15166 354 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 SPANXN3Q5MJ09 141 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 PAQR3Q6TCH7 311 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 SEZ6L2Q6UXD5 910 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 ZNF793Q6ZN11 406 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 PLCZ1Q86YW0 608 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 KRT78Q8N1N4 520 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 ACOT4Q8N9L9 421 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 SRFBP1Q8NEF9 429 aaKnown RBP11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 OR6K3Q8NGY3 331 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 CALML6Q8TD86 181 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 FAM216AQ8WUB2 273 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 TANKQ92844 425 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 S100PBPQ96BU1 408 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 KCNC2Q96PR1 638 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 F2RL3Q96RI0 385 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 NODALQ96S42 347 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 RPF2Q9H7B2 306 aaKnown RBP11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 NT5DC2Q9H857 520 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 MOCS1Q9NZB8 636 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 NFU1Q9UMS0 254 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 TEX264Q9Y6I9 313 aa11.24□□□□□ -0.61
AC004540.1-204ENST00000449537 DPRXA6NFQ7 191 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 ATP8B1O43520 1251 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 ZIC3O60481 467 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 RAMP1O60894 148 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 PPM1BO75688 479 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 CLPSP04118 112 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 IL11P20809 199 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 TCEA1P23193 301 aaKnown RBP11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 ATP5A1P25705 553 aaKnown RBP11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 ADH6P28332 368 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 STX2P32856 288 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 CTBP2P56545 445 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 CLDN15P56746 228 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 C21orf58P58505 322 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 VSNL1P62760 191 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 NAB1Q13506 487 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 DOC2AQ14183 400 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 SLBPQ14493 270 aaKnown RBP eCLIP11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 STEAP4Q687X5 459 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 DESI1Q6ICB0 168 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 CYS1Q717R9 158 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 TRMT10CQ7L0Y3 403 aaKnown RBP11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 STK32CQ86UX6 486 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 ZBED8Q8IZ13 594 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 SNX31Q8N9S9 440 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 PYROXD1Q8WU10 500 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 HSD17B8Q92506 261 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 ADIPOR1Q96A54 375 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 LINGO1Q96FE5 620 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 PKNOX2Q96KN3 472 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 SIGLEC10Q96LC7 697 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 TBCDQ9BTW9 1192 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 CBLN4Q9NTU7 201 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 NSMCE4AQ9NXX6 385 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 DKKL1Q9UK85 242 aa11.23□□□□□ -0.61
AC004540.1-204ENST00000449537 H0YC42 278 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 HAUS5O94927 633 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 ALX3O95076 343 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 AIFM1O95831 613 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 PLGP00747 810 aaPredicted RBP11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 ABHD2P08910 425 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 FCGR2AP12318 317 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 GNAZP19086 355 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 SSTR4P31391 388 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 EFNA4P52798 201 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 SUCLG1P53597 346 aaKnown RBP11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 TPD52P55327 224 aaPredicted RBP11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 CRYMQ14894 314 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 TAB1Q15750 504 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 AP5B1Q2VPB7 878 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 SHISA2Q6UWI4 295 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 SLCO4C1Q6ZQN7 724 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 HDXQ7Z353 690 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 GALNT7Q86SF2 657 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 FBXO36Q8NEA4 188 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 PIWIL2Q8TC59 973 aaKnown RBP11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 CDKL2Q92772 493 aa11.22□□□□□ -0.61
AC004540.1-204ENST00000449537 HGDQ93099 445 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms