RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 OR6C76A6NM76 312 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 A8MVJ9 347 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 PEX12O00623 359 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 ARPC2O15144 300 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 STAMBPO95630 424 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 NR2F1P10589 423 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 PCGF2P35227 344 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 MAGEA8P43361 318 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 RFX3P48380 749 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 HPCAP84074 193 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 CDK6Q00534 326 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 MS4A2Q01362 244 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 FUT5Q11128 374 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 FLOT2Q14254 428 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 MYBPC3Q14896 1274 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 EXT1Q16394 746 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 ZNF630Q2M218 657 aaPredicted RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 GPAT3Q53EU6 434 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 RPS26P11Q5JNZ5 115 aaPredicted RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 CCNJQ5T5M9 372 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 CYP2R1Q6VVX0 501 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 FAM13CQ8NE31 585 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 HIPK4Q8NE63 616 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 SLC38A5Q8WUX1 472 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 KCNE4Q8WWG9 221 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 FGF11Q92914 225 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 RMND5BQ96G75 393 aaPredicted RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 VPS50Q96JG6 964 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 STACQ99469 402 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 EFHD1Q9BUP0 239 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 SEMA4CQ9C0C4 833 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 WWTR1Q9GZV5 400 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 PIGUQ9H490 435 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 A4GALTQ9NPC4 353 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 DUSP22Q9NRW4 184 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 PPIEQ9UNP9 301 aaKnown RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 ANGPT4Q9Y264 503 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 OR10H1Q9Y4A9 318 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 PRAMEF27A3QJZ7 478 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 CDC14CA4D256 554 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 A8MUI8 341 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 CXCR6O00574 342 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 GMNNO75496 209 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 NKX2-2O95096 273 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 AGR2O95994 175 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 TFPTP0C1Z6 253 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 GGT1P19440 569 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 ATP6V1B2P21281 511 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 RNF4P78317 190 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 TXNL4AP83876 142 aaKnown RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 RBBP4Q09028 425 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 LRRC23Q53EV4 343 aaPredicted RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 EXOSC6Q5RKV6 272 aaKnown RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 ATP1A1-AS1Q5TC04 95 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 DHFR2Q86XF0 187 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 PTRH1Q86Y79 214 aaKnown RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 ANKFN1Q8N957 763 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 OR4N2Q8NGD1 307 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 ADAMTS17Q8TE56 1095 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 WDR60Q8WVS4 1066 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 FAM162AQ96A26 154 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 IMMP1LQ96LU5 166 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 BTBD9Q96Q07 612 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 NXF5Q9H1B4 397 aaKnown RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 LIN28AQ9H9Z2 209 aaKnown RBP13.56□□□□□ -0.24
TNF-208ENST00000449264 Q9N2J8 555 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 MAGEL2Q9UJ55 1249 aa13.56□□□□□ -0.24
TNF-208ENST00000449264 IGF2RP11717 2491 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 A0A1W2PQ72 361 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 TLX3O43711 291 aaPredicted RBP13.55□□□□□ -0.24
TNF-208ENST00000449264 H6PDO95479 791 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 HPP00738 406 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 ADRB1P08588 477 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 CT45A8P0DMV1 189 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 CT45A9P0DMV2 189 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 PRKAR1AP10644 381 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 MAP3K8P41279 467 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 NR0B1P51843 470 aaKnown RBP13.55□□□□□ -0.24
TNF-208ENST00000449264 POU6F2P78424 691 aaPredicted RBP13.55□□□□□ -0.24
TNF-208ENST00000449264 CT45A2Q5DJT8 189 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 DCST2Q5T1A1 773 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 PLAG1Q6DJT9 500 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 GLYATQ6IB77 296 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 FIGNL1Q6PIW4 674 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 BHLHE22Q8NFJ8 381 aaPredicted RBP13.55□□□□□ -0.24
TNF-208ENST00000449264 HOXB13Q92826 284 aaPredicted RBP13.55□□□□□ -0.24
TNF-208ENST00000449264 ADIPOR1Q96A54 375 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 NACC2Q96BF6 587 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 LCORQ96JN0 433 aaPredicted RBP13.55□□□□□ -0.24
TNF-208ENST00000449264 LMF1Q96S06 567 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 DEFB126Q9BYW3 111 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 GIN1Q9NXP7 522 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 GPR55Q9Y2T6 319 aaPredicted RBP13.55□□□□□ -0.24
TNF-208ENST00000449264 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
TNF-208ENST00000449264 DOCK10Q96BY6 2186 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 H0YHG0 523 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 KLK10O43240 276 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 CHRM4P08173 479 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 PPICP45877 212 aa13.54□□□□□ -0.24
TNF-208ENST00000449264 CRISP3P54108 245 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms