RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 RELL1Q8IUW5 271 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 TMEM151AQ8N4L1 468 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 KAT2AQ92830 837 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 SFXN2Q96NB2 322 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 PAFAH2Q99487 392 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 SMR3AQ99954 134 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 CDC42EP4Q9H3Q1 356 aaKnown RBP14.09□□□□□ -0.15
TRA2A-203ENST00000448549 NEUROD4Q9HD90 331 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 CLCF1Q9UBD9 225 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 VPS29Q9UBQ0 182 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 TRPS1Q9UHF7 1281 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 KIAA1549Q9HCM3 1950 aa14.09□□□□□ -0.15
TRA2A-203ENST00000448549 NIPBLQ6KC79 2804 aaeCLIP14.08□□□□□ -0.16
TRA2A-203ENST00000448549 A8MXE2 369 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 TRIM49D1C9J1S8 452 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 POC1B-GALNT4F8VUJ3 575 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 MANBAO00462 879 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 TGM6O95932 706 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 IL3P08700 152 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 CHN1P15882 459 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 CD53P19397 219 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 HSD17B3P37058 310 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 SERPINB9P50453 376 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 CLDN18P56856 261 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 GAB1Q13480 694 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 TEX35Q5T0J7 233 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 Q71RC1 249 aaPredicted RBP14.08□□□□□ -0.16
TRA2A-203ENST00000448549 TAOK1Q7L7X3 1001 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 GRAMD2AQ8IUY3 354 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 CDYL2Q8N8U2 506 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 OR9A2Q8NGT5 310 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 ZNF675Q8TD23 568 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 SLC35A4Q96G79 324 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 BTBD9Q96Q07 612 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 C1QTNF3Q9BXJ4 246 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 ACBD3Q9H3P7 528 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 PIGMQ9H3S5 423 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 DKKL1Q9UK85 242 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 PACSIN3Q9UKS6 424 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 DLGAP4Q9Y2H0 992 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 WIF1Q9Y5W5 379 aa14.08□□□□□ -0.16
TRA2A-203ENST00000448549 ARHGAP21Q5T5U3 1957 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 C17orf51A8MQB3 221 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 B4DXG7 233 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 CASKO14936 926 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 ZIC3O60481 467 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 TSPAN2O60636 221 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 TNFSF13O75888 250 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 BCAS2O75934 225 aaPredicted RBP14.07□□□□□ -0.16
TRA2A-203ENST00000448549 ZNF708P17019 499 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 CHMP24386 653 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 CPOXP36551 454 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 DIO3P55073 304 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 CLCQ05315 142 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 SCIMPQ6UWF3 145 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 NPSR1Q6W5P4 371 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 LARP4Q71RC2 724 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRA2A-203ENST00000448549 BIVMQ86UB2 503 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 KRTAP1-3Q8IUG1 177 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 UHMK1Q8TAS1 419 aaKnown RBP14.07□□□□□ -0.16
TRA2A-203ENST00000448549 DCAKDQ8WVC6 231 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 SMPDL3BQ92485 455 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 EXOSC8Q96B26 276 aaKnown RBP14.07□□□□□ -0.16
TRA2A-203ENST00000448549 C18orf12Q96KH6 178 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 VSTM2LQ96N03 204 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 BEX4Q9NWD9 120 aaPredicted RBP14.07□□□□□ -0.16
TRA2A-203ENST00000448549 NDRG3Q9UGV2 375 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 MCM8Q9UJA3 840 aa14.07□□□□□ -0.16
TRA2A-203ENST00000448549 A0A1W2PNV4 684 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 GNG14A0A1W2PPG7 69 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 SUPT7LO94864 414 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 KRT6AP02538 564 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 KRT6BP04259 564 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 CTAGE8P0CG41 777 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 HSD3B1P14060 373 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 GRK2P25098 689 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 HSD3B2P26439 372 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 DPP4P27487 766 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 IL12BP29460 328 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 KRT20P35900 424 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 KRT6CP48668 564 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 GAS1P54826 345 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 EEF1A1P68104 462 aaKnown RBP14.06□□□□□ -0.16
TRA2A-203ENST00000448549 RAE1P78406 368 aaKnown RBP14.06□□□□□ -0.16
TRA2A-203ENST00000448549 NKX6-1P78426 367 aaPredicted RBP14.06□□□□□ -0.16
TRA2A-203ENST00000448549 LTBQ06643 244 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 CKAP4Q07065 602 aaKnown RBP14.06□□□□□ -0.16
TRA2A-203ENST00000448549 EFR3AQ14156 821 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 ERCC6LQ2NKX8 1250 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 UNC50Q53HI1 259 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 EEF1A1P5Q5VTE0 462 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 CTAGE4Q8IX94 777 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 OR4N2Q8NGD1 307 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 EFHD2Q96C19 240 aaPredicted RBP14.06□□□□□ -0.16
TRA2A-203ENST00000448549 ERP27Q96DN0 273 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 FOLH1BQ9HBA9 442 aa14.06□□□□□ -0.16
TRA2A-203ENST00000448549 EIF3LQ9Y262 564 aaKnown RBP14.06□□□□□ -0.16
TRA2A-203ENST00000448549 MRPS18CQ9Y3D5 142 aaKnown RBP14.06□□□□□ -0.16
TRA2A-203ENST00000448549 HCRTR2O43614 444 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms