RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 GOLGA8OA6NCC3 632 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 GOLGA8NF8WBI6 632 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 TSPAN2O60636 221 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 ZG16O60844 167 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 TRIM3O75382 744 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-204ENST00000446876 NAGAP17050 411 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 LBPP18428 481 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 PTGDSP41222 190 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 PRKAG1P54619 331 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 MAD2L1Q13257 205 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-204ENST00000446876 HYAL4Q2M3T9 481 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 CPTPQ5TA50 214 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 FNDC7Q5VTL7 733 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 C3P1Q6ZMU1 363 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 BNC2Q6ZN30 1099 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-204ENST00000446876 Q6ZPB1 254 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-204ENST00000446876 NCCRP1Q6ZVX7 275 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-204ENST00000446876 NUP54Q7Z3B4 507 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 MAVSQ7Z434 540 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 WDR75Q8IWA0 830 aaKnown RBP13.59□□□□□ -0.23
HDAC4-204ENST00000446876 TRIM42Q8IWZ5 723 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 RIMKLAQ8IXN7 391 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 RAB3IL1Q8TBN0 382 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 ZNF75CPQ92670 426 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-204ENST00000446876 ZNF597Q96LX8 424 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 COL21A1Q96P44 957 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 PSMG3-AS1Q96PY0 264 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 ADOQ96SZ5 270 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 WDR55Q9H6Y2 383 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-204ENST00000446876 VIPAS39Q9H9C1 493 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 GALNT9Q9HCQ5 603 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 ZFP64Q9NPA5 681 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 TNFRSF10DQ9UBN6 386 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 OR10H1Q9Y4A9 318 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 A0A1B0GUH1 482 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 A0A1W2PRB8 838 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 GXYLT2A0PJZ3 443 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 ANKRD33BA6NCL7 494 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 PRAMEF25A6NGN4 478 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 CCL21O00585 134 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 GNB5O14775 395 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 C6orf47O95873 294 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 TPOP07202 933 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 ALDOCP09972 364 aaKnown RBP13.58□□□□□ -0.24
HDAC4-204ENST00000446876 PRPS1L1P21108 318 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 EPHA3P29320 983 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 IL12BP29460 328 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 PTGS2P35354 604 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 RPL3P39023 403 aaKnown RBP13.58□□□□□ -0.24
HDAC4-204ENST00000446876 RFX3P48380 749 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 MASP1P48740 699 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 CLDN8P56748 225 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 RPP38P78345 283 aaKnown RBP13.58□□□□□ -0.24
HDAC4-204ENST00000446876 GAB1Q13480 694 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 SMU1Q2TAY7 513 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 PGS1Q32NB8 556 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 TBCELQ5QJ74 424 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 RGS9BPQ6ZS82 235 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 LARP4Q71RC2 724 aaKnown RBP eCLIP13.58□□□□□ -0.24
HDAC4-204ENST00000446876 CD163Q86VB7 1156 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 KIRREL3Q8IZU9 778 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 GOLGA6L1Q8N7Z2 621 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 NUP43Q8NFH3 380 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 RELTQ969Z4 430 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 COQ8BQ96D53 544 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 GIMAP5Q96F15 307 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 OTUB1Q96FW1 271 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-204ENST00000446876 SLC35A4Q96G79 324 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 SECISBP2Q96T21 854 aaKnown RBP13.58□□□□□ -0.24
HDAC4-204ENST00000446876 YIPF4Q9BSR8 244 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 LMF2Q9BU23 707 aaKnown RBP13.58□□□□□ -0.24
HDAC4-204ENST00000446876 OSBPL11Q9BXB4 747 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 SLC6A15Q9H2J7 730 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 RYDENQ9NUL5 291 aaKnown RBP13.58□□□□□ -0.24
HDAC4-204ENST00000446876 KLRF1Q9NZS2 232 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 FLRT3Q9NZU0 649 aa13.58□□□□□ -0.24
HDAC4-204ENST00000446876 HECTD1Q9ULT8 2610 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 WIPF3A6NGB9 483 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 OR6C70A6NIJ9 312 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 C17orf51A8MQB3 221 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 C9JVG2 144 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 HDAC3O15379 428 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 ICOSLGO75144 302 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 IFI6P09912 130 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 ACP2P11117 423 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 CYP4B1P13584 511 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 GDF1P27539 372 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 KRT20P35900 424 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 TRPC1P48995 793 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 CASP6P55212 293 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 NME5P56597 212 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 SLC10A1Q14973 349 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 ZNHIT3Q15649 155 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-204ENST00000446876 TMEM198Q66K66 360 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 HIST2H2BCQ6DN03 193 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 OR4F3Q6IEY1 312 aa13.57□□□□□ -0.24
HDAC4-204ENST00000446876 ARHGAP11AQ6P4F7 1023 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms