RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 UCK1Q9HA47 277 aa16.31■□□□□ 0.2
SMC6-206ENST00000446852 TBC1D17Q9HA65 648 aa16.31■□□□□ 0.2
SMC6-206ENST00000446852 ANKHQ9HCJ1 492 aa16.31■□□□□ 0.2
SMC6-206ENST00000446852 CCNB1IP1Q9NPC3 277 aa16.31■□□□□ 0.2
SMC6-206ENST00000446852 MAT2BQ9NZL9 334 aa16.31■□□□□ 0.2
SMC6-206ENST00000446852 WARS2Q9UGM6 360 aaKnown RBP16.31■□□□□ 0.2
SMC6-206ENST00000446852 CLCA2Q9UQC9 943 aa16.31■□□□□ 0.2
SMC6-206ENST00000446852 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 NT5EP21589 574 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 CTSKP43235 329 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 NUDT6P53370 316 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 HPCAP84074 193 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 SRSF5Q13243 272 aaKnown RBP16.3■□□□□ 0.2
SMC6-206ENST00000446852 EXOSC6Q5RKV6 272 aaKnown RBP16.3■□□□□ 0.2
SMC6-206ENST00000446852 TYW3Q6IPR3 259 aaKnown RBP16.3■□□□□ 0.2
SMC6-206ENST00000446852 CCDC81Q6ZN84 652 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 PRSS48Q7RTY5 328 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 DEPDC4Q8N2C3 294 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 CLIP4Q8N3C7 705 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 IPCEF1Q8WWN9 437 aaPredicted RBP16.3■□□□□ 0.2
SMC6-206ENST00000446852 NELL2Q99435 816 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 RBCK1Q9BYM8 510 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 PLCXD1Q9NUJ7 323 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 UCKL1Q9NWZ5 548 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 IMPAD1Q9NX62 359 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 PSORS1C1Q9UIG5 152 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 A0A0A6YYC8 382 aaPredicted RBP16.3■□□□□ 0.2
SMC6-206ENST00000446852 I3L1I5 382 aaPredicted RBP16.3■□□□□ 0.2
SMC6-206ENST00000446852 CHST10O43529 356 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 PLOD3O60568 738 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 AGR2O95994 175 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 OSMP13725 252 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 ACVR2AP27037 513 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 CNR2P34972 360 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 CSNK1EP49674 416 aaKnown RBP16.3■□□□□ 0.2
SMC6-206ENST00000446852 UGT2B15P54855 530 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 GFERP55789 205 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 CSNK2BP67870 215 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 EXOSC7Q15024 291 aaKnown RBP16.3■□□□□ 0.2
SMC6-206ENST00000446852 ARHGAP11BQ3KRB8 267 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 CCNJQ5T5M9 372 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 SLC16A12Q6ZSM3 486 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 MORN4Q8NDC4 146 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 OR52P1PQ8NH57 321 aa16.3■□□□□ 0.2
SMC6-206ENST00000446852 A0A087WV62 115 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 CENPVL1A0A0U1RR11 272 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 LMO7DNF2Z398 122 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 PRKAR1BP31321 381 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 TARDBPQ13148 414 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMC6-206ENST00000446852 DGAT2L6Q6ZPD8 337 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 OR4K5Q8NGD3 323 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 RORBQ92753 470 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 COPS4Q9BT78 406 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 ACOT13Q9NPJ3 140 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 C11orf16Q9NQ32 467 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 FKBP14Q9NWM8 211 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 WDR45Q9Y484 360 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 CLDN24A6NM45 220 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 NOL3O60936 208 aaKnown RBP16.29■□□□□ 0.2
SMC6-206ENST00000446852 ZBTB11O95625 1053 aaPredicted RBP16.29■□□□□ 0.2
SMC6-206ENST00000446852 TP53P04637 393 aaPredicted RBP16.29■□□□□ 0.2
SMC6-206ENST00000446852 FOSL2P15408 326 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 CDC42P60953 191 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 HNRNPKP61978 463 aaKnown RBP eCLIP16.29■□□□□ 0.23e-6■□□□□ 9
SMC6-206ENST00000446852 MVKQ03426 396 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 INAVAQ3KP66 663 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 DHRS4L2Q6PKH6 230 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 ZNF675Q8TD23 568 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 RAB2BQ8WUD1 216 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 TCTN2Q96GX1 697 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 SDF2Q99470 211 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 ASXL3Q9C0F0 2248 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 PIGUQ9H490 435 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 SELENONQ9NZV5 590 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 HCN3Q9P1Z3 774 aa16.29■□□□□ 0.2
SMC6-206ENST00000446852 FOXS1O43638 330 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 MRPS14O60783 128 aaKnown RBP16.28■□□□□ 0.2
SMC6-206ENST00000446852 SLITRK5O94991 958 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 MMP11P24347 488 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 C21orf33P30042 268 aaPredicted RBP16.28■□□□□ 0.2
SMC6-206ENST00000446852 AVPR1BP47901 424 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 GABRA4P48169 554 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 HOXC5Q00444 222 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 TEKQ02763 1124 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 ILKQ13418 452 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 PUS10Q3MIT2 529 aaKnown RBP16.28■□□□□ 0.2
SMC6-206ENST00000446852 ZER1Q7Z7L7 766 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 CAMKK1Q8N5S9 505 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 PIK3R3Q92569 461 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 GGHQ92820 318 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 CLDN23Q96B33 292 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 CTHRC1Q96CG8 243 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 GPA33Q99795 319 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.28■□□□□ 0.2
SMC6-206ENST00000446852 POLR2J3Q9H1A7 115 aaKnown RBP16.28■□□□□ 0.2
SMC6-206ENST00000446852 ZNF443Q9Y2A4 671 aaPredicted RBP16.28■□□□□ 0.2
SMC6-206ENST00000446852 CACNA1IQ9P0X4 2223 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 CLCA1A8K7I4 914 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 STK25O00506 426 aa16.28■□□□□ 0.2
SMC6-206ENST00000446852 SRPX2O60687 465 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms