RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CFLARO15519 480 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 LCMT2O60294 686 aaKnown RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FCMRO60667 390 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 LRCH4O75427 683 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 AP2A2O94973 939 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FCER2P06734 321 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 SLC35G4P0C7Q5 338 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 PPIAL4GP0DN37 164 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 PNMTP11086 282 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ANXA8P13928 327 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 UQCRBP14927 111 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 NT5EP21589 574 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 AADACP22760 399 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 MAT2AP31153 395 aaKnown RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 MAP2K2P36507 400 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FEN1P39748 380 aaKnown RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 HTR5AP47898 357 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FHITP49789 147 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 BACE1P56817 501 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FGL1Q08830 312 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 SRSF5Q13243 272 aaKnown RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ZNF74Q16587 644 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FAM106AQ4KMX7 169 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 DCAF12Q5T6F0 453 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ATP1A1-AS1Q5TC04 95 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ANXA8L1Q5VT79 327 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 DMKNQ6E0U4 476 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ADAM5Q6NVV9 412 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 STEAP1BQ6NZ63 245 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 LEKR1Q6ZMV7 388 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 Q6ZPB1 254 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 DPY19L4Q7Z388 723 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 LINC00518Q8N0U6 118 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 RELL2Q8NC24 303 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 BBOF1Q8ND07 529 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 OR5D13Q8NGL4 314 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 APOBEC4Q8WW27 367 aaKnown RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 DYRK2Q92630 601 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 AKR1E2Q96JD6 320 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 USP28Q96RU2 1077 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FAM192AQ9GZU8 254 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FNDC4Q9H6D8 234 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 POLD4Q9HCU8 107 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 C1orf123Q9NWV4 160 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 ERRFI1Q9UJM3 462 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 IKZF3Q9UKT9 509 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 WIPI2Q9Y4P8 454 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 KLF2Q9Y5W3 355 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 FKBP7Q9Y680 259 aa3.82□□□□□ -1.8
HMGB1P48-201ENST00000446155 CCDC7Q96M83 1385 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 NEDD4P46934 1319 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 IGHV4-4A0A075B6R2 117 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 TRAV26-1A0A087WT03 109 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 GOLGA6L7A0A1B0GV03 622 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SERTM2A0A1B0GWG4 89 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 NCF1BA6NI72 391 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 WASHC1A8K0Z3 465 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 NCF1CA8MVU1 366 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 MEI4A8MW99 385 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 HHLA1C9JL84 531 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 H3BMH7 237 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SLC1A7O00341 560 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 ZG16O60844 167 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 TRMUO75648 421 aaKnown RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 NXPH2O95156 264 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 GSTA1P08263 222 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 PRKAR1AP10644 381 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SLC2A3P11169 496 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 DBTP11182 482 aaKnown RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 CCDC130P13994 396 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 PCMT1P22061 227 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 OR3A2P47893 321 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 MRPS6P82932 125 aaKnown RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 CDR2Q01850 454 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 MAP2K1Q02750 393 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 IFT88Q13099 833 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 ELAVL3Q14576 367 aaKnown RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 EFTUD2Q15029 972 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SSX2Q16385 188 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 GTDC1Q4AE62 458 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SPANXN4Q5MJ08 99 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 ZNF790Q6PG37 636 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 GSG1LQ6UXU4 331 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 ZNF562Q6V9R5 426 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 ZNF730Q6ZMV8 503 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 Q6ZVQ6 151 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 RANBP3LQ86VV4 465 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 PHC2Q8IXK0 858 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 DND1Q8IYX4 353 aaKnown RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 PYROXD2Q8N2H3 581 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SYT14Q8NB59 555 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 OR9K2Q8NGE7 335 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SPATA3Q8NHX4 192 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 RAB3IL1Q8TBN0 382 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SLC2A14Q8TDB8 520 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 RPL3LQ92901 407 aaKnown RBP3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 OMA1Q96E52 524 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 COQ2Q96H96 371 aa3.81□□□□□ -1.8
HMGB1P48-201ENST00000446155 SLC39A3Q9BRY0 314 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms