RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 NARFQ9UHQ1 456 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 PYCARDQ9ULZ3 195 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 SPATA2Q9UM82 520 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 SMAD5-AS1Q9Y6J3 95 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MYH6P13533 1939 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MROH7-TTC4A0A0A0MT08 1334 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 KIAA1551Q9HCM1 1747 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 DLEC1Q9Y238 1755 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 BTAF1O14981 1849 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 CACNA1SQ13698 1873 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC88AQ3V6T2 1871 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 IGHV3-16A0A0C4DH30 117 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 PRKAB2O43741 272 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 KIAA0513O60268 411 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 GALR3O60755 368 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 HCKP08631 526 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 MMP10P09238 476 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 FOLR2P14207 255 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 ATP6V1B1P15313 513 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 ACADSP16219 412 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 UGT1A6P19224 532 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 HMGB2P26583 209 aaKnown RBP3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 KIF5BP33176 963 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 COPB2P35606 906 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 GYG1P46976 350 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 SLC8A3P57103 927 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 GSTO1P78417 241 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 RPA4Q13156 261 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 FASTKQ14296 549 aaKnown RBP3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 MUC21Q5SSG8 566 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 DCAF12Q5T6F0 453 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZNF410Q86VK4 478 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 P2RY8Q86VZ1 359 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 CATSPER3Q86XQ3 398 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 LRRC8AQ8IWT6 810 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 GVQW1Q8N7I0 195 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 POM121L12Q8N7R1 296 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 CSNK1G2-AS1Q8NCQ2 148 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC148Q8NFR7 591 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 OR4A16Q8NH70 328 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 SDR42E1Q8WUS8 393 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 TCP11Q8WWU5 503 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 CDHR1Q96JP9 859 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 CXorf58Q96LI9 332 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 PYGO2Q9BRQ0 406 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 RIOK1Q9BRS2 568 aaKnown RBP3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 RAB11FIP5Q9BXF6 653 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 KCNMB3Q9NPA1 279 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZCCHC3Q9NUD5 404 aaKnown RBP3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 CYP39A1Q9NYL5 469 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 TEKT2Q9UIF3 430 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 RARRES3Q9UL19 164 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 TEX264Q9Y6I9 313 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 COL1A1P02452 1464 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 THSD7AQ9UPZ6 1657 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 NAV1Q8NEY1 1877 aa3.58□□□□□ -1.84
HMGB3P6-201ENST00000444896 SLC28A1O00337 649 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 OGTO15294 1046 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 VEGFDO43915 354 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 LY75O60449 1722 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 CXCL14O95715 111 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 OLFM2O95897 454 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 TOP1P11387 765 aaKnown RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 BCL3P20749 454 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 CALML3P27482 149 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 RFC4P35249 363 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 SLC1A4P43007 532 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 RPS8P62241 208 aaKnown RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 HERV-K104P63124 156 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 DYNLL1P63167 89 aaKnown RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 MECOMQ03112 1051 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 ACY1Q03154 408 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZFP36L1Q07352 338 aaKnown RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 HSPA14Q0VDF9 509 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 PNOCQ13519 176 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 SYCP1Q15431 976 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 C2orf76Q3KRA6 126 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 SBK1Q52WX2 424 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 B3GLCTQ6Y288 498 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 NUFIP2Q7Z417 695 aaKnown RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC71Q8IV32 467 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 ZNF781Q8N8C0 355 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 MLKLQ8NB16 471 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 RELL2Q8NC24 303 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 CHDHQ8NE62 594 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 GOLGA5Q8TBA6 731 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 ESAMQ96AP7 390 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 NTNG2Q96CW9 530 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 C16orf45Q96MC5 204 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 ROBO3Q96MS0 1386 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 CCDC43Q96MW1 224 aaKnown RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 FOXN4Q96NZ1 517 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 JPH2Q9BR39 696 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 XPO4Q9C0E2 1151 aaKnown RBP3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 SLC26A1Q9H2B4 701 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 GANQ9H2C0 597 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 LIME1Q9H400 295 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 NT5DC2Q9H857 520 aa3.57□□□□□ -1.84
HMGB3P6-201ENST00000444896 RPS10P5Q9NQ39 176 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms