RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 EIPR1Q53HC9 387 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 CT45A2Q5DJT8 189 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 SH2D4BQ5SQS7 431 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 TMEM81Q6P7N7 255 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 TMEM107Q6UX40 140 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 LARP4Q71RC2 724 aaKnown RBP eCLIP18.34■□□□□ 0.53
LRCH3-208ENST00000443727 HOMEZQ8IX15 550 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 DDIASQ8IXT1 998 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.34■□□□□ 0.53
LRCH3-208ENST00000443727 GFM2Q969S9 779 aaKnown RBP18.34■□□□□ 0.53
LRCH3-208ENST00000443727 SERHLQ9NQF3 203 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 DDX18Q9NVP1 670 aaKnown RBP18.34■□□□□ 0.53
LRCH3-208ENST00000443727 SLC17A7Q9P2U7 560 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 CAMK2AQ9UQM7 478 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 CCL27Q9Y4X3 112 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 A0A0G2JNJ9 132 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 ENO4A6NNW6 628 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 AHRRA9YTQ3 701 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 SNPHO15079 494 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 TOXO94900 526 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 PRPH2P23942 346 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 MRPS22P82650 360 aaKnown RBP18.33■□□□□ 0.52
LRCH3-208ENST00000443727 CRYZQ08257 329 aaKnown RBP18.33■□□□□ 0.52
LRCH3-208ENST00000443727 SF3B4Q15427 424 aaKnown RBP eCLIP18.33■□□□□ 0.52
LRCH3-208ENST00000443727 PRSS53Q2L4Q9 553 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 WIPI1Q5MNZ9 446 aaPredicted RBP18.33■□□□□ 0.52
LRCH3-208ENST00000443727 KANK2Q63ZY3 851 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 WDR93Q6P2C0 686 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 YRDCQ86U90 279 aaKnown RBP18.33■□□□□ 0.52
LRCH3-208ENST00000443727 LURAP1LQ8IV03 231 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 PM20D2Q8IYS1 436 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 TCP10LQ8TDR4 215 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 CAVIN3Q969G5 261 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 SLC35A4Q96G79 324 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 TIMP4Q99727 224 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 MECRQ9BV79 373 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 ENKD1Q9H0I2 346 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 GLIPR2Q9H4G4 154 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 Q9UFV3 132 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 APCP25054 2843 aa18.33■□□□□ 0.52
LRCH3-208ENST00000443727 NCKAP5O14513 1909 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 A0A087WV62 115 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 NPHS1O60500 1241 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 CBR3O75828 277 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 CHRNGP07510 517 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 TACR1P25103 407 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 ADH7P40394 386 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 PTGDSP41222 190 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 RPL38P63173 70 aaKnown RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 KIAA0040Q15053 153 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 ZNHIT3Q15649 155 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 GALNTL6Q49A17 601 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 ARL13AQ5H913 290 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 RIPPLY2Q5TAB7 128 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 VASNQ6EMK4 673 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 NPSR1Q6W5P4 371 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 ZNF295-AS1Q8N0V1 137 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 FAM83FQ8NEG4 500 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 OR2T11Q8NH01 316 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 OR14L1PQ8NHC6 308 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 AGR3Q8TD06 166 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 ABTB1Q969K4 478 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 EFHD2Q96C19 240 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 DTNBP1Q96EV8 351 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 EGLN2Q96KS0 407 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 AMDHD1Q96NU7 426 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 CCT7Q99832 543 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 C19orf53Q9UNZ5 99 aaPredicted RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 EXO1Q9UQ84 846 aaKnown RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 TRAF6Q9Y4K3 522 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 DNAJC15Q9Y5T4 150 aa18.32■□□□□ 0.52
LRCH3-208ENST00000443727 PHF3Q92576 2039 aaKnown RBP18.32■□□□□ 0.52
LRCH3-208ENST00000443727 HSPB2A8KAH6 182 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 TMEM233B4DJY2 109 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 PDPK1O15530 556 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 AKAP10O43572 662 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 TSPAN2O60636 221 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 BMP7P18075 431 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 GPC1P35052 558 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 PNLIPRP2P54317 469 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 HSPB2Q16082 182 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 ACSF3Q4G176 576 aaPredicted RBP18.31■□□□□ 0.52
LRCH3-208ENST00000443727 ANKRD26P1Q6NSI1 321 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 Q6ZSR9 355 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 WDR53Q7Z5U6 358 aaPredicted RBP18.31■□□□□ 0.52
LRCH3-208ENST00000443727 CLYBLQ8N0X4 340 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 OR4N2Q8NGD1 307 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 TWIST2Q8WVJ9 160 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 PPCDCQ96CD2 204 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 TSSK3Q96PN8 268 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 UGT2B28Q9BY64 529 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 TUBB1Q9H4B7 451 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 NPDC1Q9NQX5 325 aaPredicted RBP18.31■□□□□ 0.52
LRCH3-208ENST00000443727 WIF1Q9Y5W5 379 aa18.31■□□□□ 0.52
LRCH3-208ENST00000443727 EXPH5Q8NEV8 1989 aa18.3■□□□□ 0.52
LRCH3-208ENST00000443727 NPIPB8E9PQR5 432 aa18.3■□□□□ 0.52
LRCH3-208ENST00000443727 UPK1AO00322 258 aa18.3■□□□□ 0.52
LRCH3-208ENST00000443727 PLOD2O00469 737 aa18.3■□□□□ 0.52
LRCH3-208ENST00000443727 FGF4P08620 206 aa18.3■□□□□ 0.52
LRCH3-208ENST00000443727 MSX1P28360 303 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms