RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 FTSJ1Q9UET6 329 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 PCDHGB1Q9Y5G3 927 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 PCDHGA6Q9Y5G7 932 aa12.31□□□□□ -0.44
CPSF4-206ENST00000441580 TNRC6BQ9UPQ9 1833 aaKnown RBP12.31□□□□□ -0.44
CPSF4-206ENST00000441580 SPAG17Q6Q759 2223 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 IGHV1OR21-1A0A087WYE8 117 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 A0A1B0GVT2 93 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 SH3PXD2BA1X283 911 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 AP3D1O14617 1153 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 HRO43593 1189 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 HCRTR1O43613 425 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 FOXS1O43638 330 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 NME6O75414 186 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 STX11O75558 287 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 DBIP07108 87 aaKnown RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 OSMP13725 252 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 GLB1P16278 677 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 GSTM3P21266 225 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 GALNSP34059 522 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 FNTBP49356 437 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 ARL4DP49703 201 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 TAS2R41P59536 307 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 SLC35A2P78381 396 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 POU6F2P78424 691 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 ALDH6A1Q02252 535 aaKnown RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 MLLT1Q03111 559 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 MAP4K2Q12851 820 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 DUSP8Q13202 625 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 BIKQ13323 160 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 SERTAD2Q14140 314 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 TRAM2Q15035 370 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 TYW3Q6IPR3 259 aaKnown RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 PGBD2Q6P3X8 592 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 KLHL17Q6TDP4 642 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 RANBP3LQ86VV4 465 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 CLVS1Q8IUQ0 354 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 ENTHD1Q8IYW4 607 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 SPARTQ8N0X7 666 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 GALNT15Q8N3T1 639 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 OR4D11Q8NGI4 311 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 OR6T1Q8NGN1 323 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 OR13F1Q8NGS4 319 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 ZFAND2BQ8WV99 257 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 FCGR1BQ92637 280 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 MUL1Q969V5 352 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 ISOC1Q96CN7 298 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 LMF2Q9BU23 707 aaKnown RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 ARMC7Q9H6L4 198 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 MTHFD2LQ9H903 347 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 CXorf21Q9HAI6 301 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 FANCEQ9HB96 536 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 KRCC1Q9NPI7 259 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-206ENST00000441580 PRTFDC1Q9NRG1 225 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 PLCXD1Q9NUJ7 323 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 UCKL1Q9NWZ5 548 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 HCN3Q9P1Z3 774 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 LRIT1Q9P2V4 623 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 RHCGQ9UBD6 479 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 GMEB2Q9UKD1 530 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF232Q9UNY5 417 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 RNF6Q9Y252 685 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 KCNE3Q9Y6H6 103 aa12.3□□□□□ -0.44
CPSF4-206ENST00000441580 SCN3AQ9NY46 2000 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 SYNDIG1LA6NDD5 238 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 ZAR1LA6NP61 321 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 B4GAT1O43505 415 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 RGS10O43665 173 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 PRAMEF2O60811 474 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 CTNSO60931 367 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 DNAJB6O75190 326 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 SEC14L2O76054 403 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 OR5F1O95221 314 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 EPPINO95925 133 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 HTR1AP08908 422 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 MSL3P1P0C860 447 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 EPHA8P29322 1005 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 ALDH4A1P30038 563 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 FMO3P31513 532 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 PEX19P40855 299 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 IDH2P48735 452 aaKnown RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 CRISP1P54107 249 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 HSD17B7P56937 341 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 HSD11B2P80365 405 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 ST3GAL3Q11203 375 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 STX4Q12846 297 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 COX10Q12887 443 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 SLC13A2Q13183 592 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 TRMT12Q53H54 448 aaKnown RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 PRPF38BQ5VTL8 546 aaKnown RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 YOD1Q5VVQ6 348 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 PMS2CLQ68D20 193 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 CWF19L1Q69YN2 538 aaKnown RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 CD300LDQ6UXZ3 194 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 ZNF836Q6ZNA1 936 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 PLEKHM3Q6ZWE6 761 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 PRSS48Q7RTY5 328 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 COMTD1Q86VU5 262 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 CCDC71Q8IV32 467 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-206ENST00000441580 SLC35F3Q8IY50 421 aa12.29□□□□□ -0.44
CPSF4-206ENST00000441580 SLC38A4Q969I6 547 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms