RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 ZCCHC3Q9NUD5 404 aaKnown RBP17.91■□□□□ 0.46
SEMA3B-206ENST00000439487 CNOT11Q9UKZ1 510 aaKnown RBP17.91■□□□□ 0.46
SEMA3B-206ENST00000439487 RNASET2O00584 256 aaKnown RBP17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 TP53I11O14683 189 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 SCN2BO60939 215 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 REM1O75628 298 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 SLC22A3O75751 556 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 WISP2O76076 250 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 CPSF4O95639 269 aaKnown RBP17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 NAGAP17050 411 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 DNASE1L1P49184 302 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 CCT3P49368 545 aaKnown RBP17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 HBA1P69905 142 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 ALDH6A1Q02252 535 aaKnown RBP17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 GAB1Q13480 694 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 DPY19L1Q2PZI1 675 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 RNFT1Q5M7Z0 435 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 ANXA8L1Q5VT79 327 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 ATCAYQ86WG3 371 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 FBXW8Q8N3Y1 598 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 GALNT11Q8NCW6 608 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 FBXO30Q8TB52 745 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 SPPL2AQ8TCT8 520 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 C16orf58Q96GQ5 468 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 ZBTB18Q99592 522 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 YIPF4Q9BSR8 244 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 LMF2Q9BU23 707 aaKnown RBP17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 TSPAN10Q9H1Z9 355 aaPredicted RBP17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 PROK2Q9HC23 129 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 DCTN4Q9UJW0 460 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 VPS4AQ9UN37 437 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 OR10H1Q9Y4A9 318 aa17.9■□□□□ 0.46
SEMA3B-206ENST00000439487 TENM4Q6N022 2769 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 PRSS51A0A1B0GVH4 220 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 UGT2B11O75310 529 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 GABRA3P34903 492 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 SOAT1P35610 550 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 MDH1P40925 334 aaKnown RBP17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 PRR5P85299 388 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 ZNHIT3Q15649 155 aaPredicted RBP17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 SPDYE7PQ495Y7 208 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 BICRALQ6AI39 1079 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 PAOXQ6QHF9 649 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 NUP54Q7Z3B4 507 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 ZFP62Q8NB50 900 aaPredicted RBP17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 OR4A15Q8NGL6 344 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 OR5AK3PQ8NH89 298 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 DIO2Q92813 273 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 HGDQ93099 445 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 MS4A4EQ96PG1 132 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 NODALQ96S42 347 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 SLX1AQ9BQ83 275 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 FAM173AQ9BQD7 235 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 NEUROD4Q9HD90 331 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 SDR39U1Q9NRG7 319 aaPredicted RBP17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 ZIM2Q9NZV7 527 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 CNIH4Q9P003 139 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 PCDHGB4Q9UN71 923 aa17.89■□□□□ 0.45
SEMA3B-206ENST00000439487 GXYLT2A0PJZ3 443 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 CYSRT1A8MQ03 144 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 TSPAN2O60636 221 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 VIMP08670 466 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 ACP2P11117 423 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 GNLYP22749 145 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 MAP3K8P41279 467 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 UQCRFS1P47985 274 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 TDGF1P3P51864 188 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 MRPL49Q13405 166 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 TP53BP2Q13625 1128 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 MFSD12Q6NUT3 480 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 MYO7BQ6PIF6 2116 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 CLEC4FQ8N1N0 589 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 MIER2Q8N344 545 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 CDRT4Q8N9R6 151 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 POGLUT1Q8NBL1 392 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 GLB1L3Q8NCI6 653 aaPredicted RBP17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 VPS37AQ8NEZ2 397 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 OR9I1Q8NGQ6 314 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 SFXN5Q8TD22 340 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 PIK3R3Q92569 461 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 SLC9A6Q92581 669 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 EFHD2Q96C19 240 aaPredicted RBP17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 OTUB1Q96FW1 271 aaPredicted RBP17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 COL21A1Q96P44 957 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 ADOQ96SZ5 270 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 Q9N2J8 555 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 FGFR1OP2Q9NVK5 253 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 FAM120CQ9NX05 1096 aaKnown RBP17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 TUBA8Q9NY65 449 aaPredicted RBP17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 CBLCQ9ULV8 474 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 FLNCQ14315 2725 aa17.88■□□□□ 0.45
SEMA3B-206ENST00000439487 DIDO1Q9BTC0 2240 aaKnown RBP17.87■□□□□ 0.45
SEMA3B-206ENST00000439487 TTC36A6NLP5 189 aa17.87■□□□□ 0.45
SEMA3B-206ENST00000439487 NPIPA5E9PKD4 350 aa17.87■□□□□ 0.45
SEMA3B-206ENST00000439487 NKX2-2O95096 273 aa17.87■□□□□ 0.45
SEMA3B-206ENST00000439487 WISP1O95388 367 aa17.87■□□□□ 0.45
SEMA3B-206ENST00000439487 CBX6O95503 412 aa17.87■□□□□ 0.45
SEMA3B-206ENST00000439487 HMGN2P05204 90 aaKnown RBP17.87■□□□□ 0.45
SEMA3B-206ENST00000439487 PGRP06401 933 aa17.87■□□□□ 0.45
SEMA3B-206ENST00000439487 EDN3P14138 238 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms