RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 FRRS1Q6ZNA5 592 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 C1orf216Q8TAB5 229 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 SLC9A6Q92581 669 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 CDS1Q92903 461 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 NAA50Q9GZZ1 169 aaKnown RBP24.03■■□□□ 1.44
CPNE1-216ENST00000437340 QRSL1Q9H0R6 528 aaKnown RBP24.03■■□□□ 1.44
CPNE1-216ENST00000437340 MIR1-1HGQ9H1L0 117 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 STARD5Q9NSY2 213 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 KLHL28Q9NXS3 571 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 PSORS1C1Q9UIG5 152 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 CLCA2Q9UQC9 943 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 MT-ND2P03891 347 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 CTSKP43235 329 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 GP2P55259 537 aaKnown RBP24.02■■□□□ 1.44
CPNE1-216ENST00000437340 ID2Q02363 134 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 COX10Q12887 443 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 NDUFA9Q16795 377 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 PRICKLE4Q2TBC4 344 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 DEFB110Q30KQ9 67 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 TRMT12Q53H54 448 aaKnown RBP24.02■■□□□ 1.44
CPNE1-216ENST00000437340 MAMSTRQ6ZN01 415 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 CCDC103Q8IW40 242 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 HSPA12BQ96MM6 686 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 GPN2Q9H9Y4 310 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-216ENST00000437340 MAN2C1Q9NTJ4 1040 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 FKBP14Q9NWM8 211 aa24.02■■□□□ 1.44
CPNE1-216ENST00000437340 INMTO95050 263 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 ZIC2O95409 532 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-216ENST00000437340 ACP2P11117 423 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 BCKDHBP21953 392 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 ACVR2AP27037 513 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 DUSP5Q16690 384 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 SYT6Q5T7P8 510 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-216ENST00000437340 PODNL1Q6PEZ8 512 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 VRK2Q86Y07 508 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 CDRT4Q8N9R6 151 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 OR52P1PQ8NH57 321 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 MYDGFQ969H8 173 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 FKBP10Q96AY3 582 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 ZG16BQ96DA0 208 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 MAP3K3Q99759 626 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 CACYBPQ9HB71 228 aaKnown RBP24.01■■□□□ 1.43
CPNE1-216ENST00000437340 DUSP22Q9NRW4 184 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 WARS2Q9UGM6 360 aaKnown RBP24.01■■□□□ 1.43
CPNE1-216ENST00000437340 NDOR1Q9UHB4 597 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 SATB2Q9UPW6 733 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 GON4LQ3T8J9 2241 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 CLCA1A8K7I4 914 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 FCMRO60667 390 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 NME6O75414 186 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-216ENST00000437340 RDH16O75452 317 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 CCNA2P20248 432 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 NT5EP21589 574 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 FOXD4Q12950 439 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-216ENST00000437340 WDR53Q7Z5U6 358 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-216ENST00000437340 HMGN2P46Q86SG4 172 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 OR9A4Q8NGU2 314 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 ANKRD9Q96BM1 317 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-216ENST00000437340 ZNF285Q96NJ3 590 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 STACQ99469 402 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 BCL7BQ9BQE9 202 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 MAT2BQ9NZL9 334 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 WDR45Q9Y484 360 aa24.01■■□□□ 1.43
CPNE1-216ENST00000437340 NCOR1O75376 2440 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 BLACEA4D250 179 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 SH3D21A4FU49 640 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 CHST10O43529 356 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 ALOX5P09917 674 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 SLC35E2P0CK97 266 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 IFNA8P32881 189 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 ALDH6A1Q02252 535 aaKnown RBP24■■□□□ 1.43
CPNE1-216ENST00000437340 MGAT2Q10469 447 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 INAVAQ3KP66 663 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 TYW3Q6IPR3 259 aaKnown RBP24■■□□□ 1.43
CPNE1-216ENST00000437340 AHSA2Q719I0 299 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 ANKRD13BQ86YJ7 626 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 PEX5LQ8IYB4 626 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 CTHRC1Q96CG8 243 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 RHNO1Q9BSD3 238 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 COPS4Q9BT78 406 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 FUNDC2Q9BWH2 189 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 CHRNA10Q9GZZ6 450 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 RAB33BQ9H082 229 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 POLR2J3Q9H1A7 115 aaKnown RBP24■■□□□ 1.43
CPNE1-216ENST00000437340 ANKRD19PQ9H560 264 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 ADAP2Q9NPF8 381 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 ACOT13Q9NPJ3 140 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 ZNF232Q9UNY5 417 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 CHST2Q9Y4C5 530 aa24■■□□□ 1.43
CPNE1-216ENST00000437340 TP53BP1Q12888 1972 aaPredicted RBP24■■□□□ 1.43
CPNE1-216ENST00000437340 SOX30O94993 753 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 AK1P00568 194 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 MASP1P48740 699 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 TARDBPQ13148 414 aaKnown RBP eCLIP23.99■■□□□ 1.43
CPNE1-216ENST00000437340 FAM53BQ14153 422 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 MORN4Q8NDC4 146 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 SIMC1Q8NDZ2 872 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 OR4K5Q8NGD3 323 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 ADAMTS18Q8TE60 1221 aa23.99■■□□□ 1.43
CPNE1-216ENST00000437340 SDF2Q99470 211 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms