RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
HDAC8-213ENST00000436675 CBX7O95931 251 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 PEPDP12955 493 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 PAX1P15863 534 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 GRK2P25098 689 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 ARL1P40616 181 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-213ENST00000436675 PCYT1AP49585 367 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 SUCLG1P53597 346 aaKnown RBP13.34□□□□□ -0.27
HDAC8-213ENST00000436675 CLDN15P56746 228 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 MRPS35P82673 323 aaKnown RBP13.34□□□□□ -0.27
HDAC8-213ENST00000436675 DR1Q01658 176 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 MAP4K2Q12851 820 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 SLMAPQ14BN4 828 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 ZKSCAN8Q15776 578 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-213ENST00000436675 PFKFB4Q16877 469 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 CCNYL2Q5T2Q4 361 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 PPP4R4Q6NUP7 873 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 OR4K17Q8NGC6 315 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 FNDC9Q8TBE3 224 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 WDR20Q8TBZ3 569 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 TMEM158Q8WZ71 300 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 CDKL2Q92772 493 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 NXNL1Q96CM4 212 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 PLPPR2Q96GM1 343 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 CDK15Q96Q40 435 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 CPNE1Q99829 537 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 MRPL1Q9BYD6 325 aaKnown RBP13.34□□□□□ -0.27
HDAC8-213ENST00000436675 REG4Q9BYZ8 158 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 IPPKQ9H8X2 491 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 ANKRA2Q9H9E1 313 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 TSC22D4Q9Y3Q8 395 aa13.34□□□□□ -0.27
HDAC8-213ENST00000436675 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC8-213ENST00000436675 ALPK2Q86TB3 2170 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 UQCRHLA0A096LP55 91 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 OR6C70A6NIJ9 312 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 HS3ST1O14792 307 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 TP73O15350 636 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 SOX30O94993 753 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 LTA4HP09960 611 aaKnown RBP13.33□□□□□ -0.28
HDAC8-213ENST00000436675 MTHFD2P13995 350 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 GFAPP14136 432 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 PCSK2P16519 638 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 HK1P19367 917 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 DRD5P21918 477 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 GP5P40197 560 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 PPICP45877 212 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 GTF2H2Q13888 395 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 BCL2A1Q16548 175 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 RAET1LQ5VY80 246 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 GTF2H2CQ6P1K8 395 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 GOLGA7Q7Z5G4 137 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 TBC1D1Q86TI0 1168 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-213ENST00000436675 CTAGE3PQ8IX95 158 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 PYROXD1Q8WU10 500 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 SERPINI1Q99574 410 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 DSN1Q9H410 356 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 ZNF639Q9UID6 485 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 CLEC4AQ9UMR7 237 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 SNX12Q9UMY4 172 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 ZNF337Q9Y3M9 751 aa13.33□□□□□ -0.28
HDAC8-213ENST00000436675 FRG2CA6NGY1 282 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 GOLGA6L10A6NI86 522 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 E7ESA3 106 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 H3BML4 177 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 FOXE1O00358 373 aaPredicted RBP13.32□□□□□ -0.28
HDAC8-213ENST00000436675 SCO2O43819 266 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 ABCB7O75027 752 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 CD8BP10966 210 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 IL12BP29460 328 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 EMDP50402 254 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 CLDN20P56880 219 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 CORO7P57737 925 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 IRF9Q00978 393 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 ILF2Q12905 390 aaKnown RBP13.32□□□□□ -0.28
HDAC8-213ENST00000436675 PON3Q15166 354 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 SGO1Q5FBB7 561 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 SLC48A1Q6P1K1 146 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 LARP4Q71RC2 724 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC8-213ENST00000436675 HIPK1Q86Z02 1210 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 ZNF611Q8N823 705 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 KCTD4Q8WVF5 259 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 AKAP1Q92667 903 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC8-213ENST00000436675 KLHL29Q96CT2 875 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 RNF122Q9H9V4 155 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 SAYSD1Q9NPB0 183 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 PRODH2Q9UF12 536 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 CES1P1Q9UKY3 287 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 SNX24Q9Y343 169 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 MRPS18CQ9Y3D5 142 aaKnown RBP13.32□□□□□ -0.28
HDAC8-213ENST00000436675 PCDHA9Q9Y5H5 950 aa13.32□□□□□ -0.28
HDAC8-213ENST00000436675 TCRBV9S1A1TA0A576 114 aa13.31□□□□□ -0.28
HDAC8-213ENST00000436675 TO15178 435 aa13.31□□□□□ -0.28
HDAC8-213ENST00000436675 PHF1O43189 567 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-213ENST00000436675 SEMA3DO95025 777 aa13.31□□□□□ -0.28
HDAC8-213ENST00000436675 SIX3O95343 332 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-213ENST00000436675 ATP1B1P05026 303 aa13.31□□□□□ -0.28
HDAC8-213ENST00000436675 CSNK2A2P19784 350 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-213ENST00000436675 SPRP35270 261 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms