RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SYT7O43581 403 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 GRAP2O75791 330 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 LYNP07948 512 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 HSPA5P11021 654 aaKnown RBP2.29□□□□□ -2.04
PTPN4-205ENST00000433888 EPB41P11171 864 aaKnown RBP2.29□□□□□ -2.04
PTPN4-205ENST00000433888 ARF4P18085 180 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-205ENST00000433888 PTPN4P29074 926 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 PRDX2P32119 198 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 ID1P41134 155 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 ACAA2P42765 397 aaKnown RBP2.29□□□□□ -2.04
PTPN4-205ENST00000433888 SLC1A3P43003 542 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 HNMTP50135 292 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 RAG2P55895 527 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 CEACAM7Q14002 265 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 STX1AQ16623 288 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 AGKQ53H12 422 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 PLPP4Q5VZY2 271 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 SLC27A4Q6P1M0 643 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 Q6P435 159 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 RGS9BPQ6ZS82 235 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 SYVN1Q86TM6 617 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 LCA5Q86VQ0 697 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 SLC43A2Q8N370 569 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF491Q8N8L2 437 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 BEST4Q8NFU0 473 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 OR13C5Q8NGS8 318 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 THRSPQ92748 146 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 GLYATL1Q969I3 302 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 SLCO4A1Q96BD0 722 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 RAB3CQ96E17 227 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 PCED1BQ96HM7 432 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 TTC25Q96NG3 672 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 ERGIC2Q96RQ1 377 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 CCT8L2Q96SF2 557 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 AGPAT1Q99943 283 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 LRRC2Q9BYS8 371 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 NACAP1Q9BZK3 213 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 TSPYL1Q9H0U9 437 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 CENPMQ9NSP4 180 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 RRP15Q9Y3B9 282 aaKnown RBP2.29□□□□□ -2.04
PTPN4-205ENST00000433888 ARHGAP21Q5T5U3 1957 aa2.29□□□□□ -2.04
PTPN4-205ENST00000433888 H3BMH7 237 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 EEF2KO00418 725 aaKnown RBP2.28□□□□□ -2.04
PTPN4-205ENST00000433888 NOL3O60936 208 aaKnown RBP2.28□□□□□ -2.04
PTPN4-205ENST00000433888 CSO75390 466 aaKnown RBP2.28□□□□□ -2.04
PTPN4-205ENST00000433888 SYNGR4O95473 234 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 CPNE6O95741 557 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 EPOP01588 193 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 CXCL10P02778 98 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 PCCBP05166 539 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 KRT3P12035 628 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 TSPAN8P19075 237 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 ACKR3P25106 362 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 TRIM23P36406 574 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 MDH1P40925 334 aaKnown RBP2.28□□□□□ -2.04
PTPN4-205ENST00000433888 SLC25A1P53007 311 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 WNT4P56705 351 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 FUT7Q11130 342 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 INAQ16352 499 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 RFTN2Q52LD8 501 aaPredicted RBP2.28□□□□□ -2.04
PTPN4-205ENST00000433888 NKAIN2Q5VXU1 208 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 NEK5Q6P3R8 708 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 AFTPHQ6ULP2 937 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 PPP1R42Q7Z4L9 355 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF573Q86YE8 665 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 LRRC17Q8N6Y2 441 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 NFAM1Q8NET5 270 aaPredicted RBP2.28□□□□□ -2.04
PTPN4-205ENST00000433888 PHYHIPQ92561 330 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 CCDC51Q96ER9 411 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 SPAG8Q99932 426 aaPredicted RBP2.28□□□□□ -2.04
PTPN4-205ENST00000433888 EDEM2Q9BV94 578 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF416Q9BWM5 594 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 NLNQ9BYT8 704 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 TMEM117Q9H0C3 514 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 WWP1Q9H0M0 922 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 RDH8Q9NYR8 311 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 PLEK2Q9NYT0 353 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 EPS15L1Q9UBC2 864 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 TRIM10Q9UDY6 481 aa2.28□□□□□ -2.04
PTPN4-205ENST00000433888 IGHV3-35A0A0C4DH35 117 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 F8WDY8 70 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 CHADO15335 359 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 RIPK2O43353 540 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 ANXA9O76027 345 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 TM7SF2O76062 418 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 OR6A2O95222 327 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 MMP10P09238 476 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 PDHBP11177 359 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 DNAJB1P25685 340 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 TMOD1P28289 359 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 HMGCLP35914 325 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 ALDH3B1P43353 468 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 FNTAP49354 379 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 METAP1P53582 386 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 STX17P56962 302 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 HMGN5P82970 282 aaKnown RBP2.27□□□□□ -2.05
PTPN4-205ENST00000433888 MYBPC1Q00872 1141 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 MECOMQ03112 1051 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 GPR50Q13585 617 aa2.27□□□□□ -2.05
PTPN4-205ENST00000433888 EXOSC7Q15024 291 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms