RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CT45A9P0DMV2 189 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 GLI4P10075 376 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 KIR3DL1P43629 444 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 ZFP36L2P47974 494 aaKnown RBP16.07■□□□□ 0.16
NUP50-208ENST00000430547 MRPS22P82650 360 aaKnown RBP16.07■□□□□ 0.16
NUP50-208ENST00000430547 ZNHIT3Q15649 155 aaPredicted RBP16.07■□□□□ 0.16
NUP50-208ENST00000430547 GALNTL6Q49A17 601 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 CT45A2Q5DJT8 189 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 SH2D4BQ5SQS7 431 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 FNDC7Q5VTL7 733 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 DESI1Q6ICB0 168 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 RNF165Q6ZSG1 346 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 LARP4Q71RC2 724 aaKnown RBP eCLIP16.07■□□□□ 0.16
NUP50-208ENST00000430547 PM20D2Q8IYS1 436 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 ULK2Q8IYT8 1036 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 TWIST2Q8WVJ9 160 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 GFM2Q969S9 779 aaKnown RBP16.07■□□□□ 0.16
NUP50-208ENST00000430547 SLC35A4Q96G79 324 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 ADOQ96SZ5 270 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 CCT7Q99832 543 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 GALNT9Q9HCQ5 603 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 MAPRE3Q9UPY8 281 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 TMED5Q9Y3A6 229 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 CCL27Q9Y4X3 112 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 DNAJC15Q9Y5T4 150 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 LRBAP50851 2863 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 ABCA12Q86UK0 2595 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 NKX2-6A6NCS4 301 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 C2orf72A6NCS6 295 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 NPIPB8E9PQR5 432 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 SNPHO15079 494 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 PDPK1O15530 556 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 NME6O75414 186 aaPredicted RBP16.06■□□□□ 0.16
NUP50-208ENST00000430547 CHRNGP07510 517 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 PTPN6P29350 595 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 GPC1P35052 558 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 SERPINB5P36952 375 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 KIAA0040Q15053 153 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 SF3B4Q15427 424 aaKnown RBP eCLIP16.06■□□□□ 0.164e-8■■■■■ 40.5
NUP50-208ENST00000430547 KRT71Q3SY84 523 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 ARL13AQ5H913 290 aaPredicted RBP16.06■□□□□ 0.16
NUP50-208ENST00000430547 RTL6Q6ICC9 239 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 MEX3BQ6ZN04 569 aaKnown RBP16.06■□□□□ 0.16
NUP50-208ENST00000430547 ZCCHC23Q6ZST2 131 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 CLYBLQ8N0X4 340 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 OR2T11Q8NH01 316 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 ZFP28Q8NHY6 868 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 AGR3Q8TD06 166 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 EGLN2Q96KS0 407 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 AMDHD1Q96NU7 426 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 TSSK3Q96PN8 268 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 SPOCK3Q9BQ16 436 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 UCK2Q9BZX2 261 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 GLIPR2Q9H4G4 154 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 C19orf53Q9UNZ5 99 aaPredicted RBP16.06■□□□□ 0.16
NUP50-208ENST00000430547 TRAF6Q9Y4K3 522 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 CREBBPQ92793 2442 aa16.06■□□□□ 0.16
NUP50-208ENST00000430547 APCP25054 2843 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 AHRRA9YTQ3 701 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 TMEM233B4DJY2 109 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 PLOD2O00469 737 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 CBR3O75828 277 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 FGF4P08620 206 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 SDC1P18827 310 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 TACR1P25103 407 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 PNLIPRP2P54317 469 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 CRYZQ08257 329 aaKnown RBP16.05■□□□□ 0.16
NUP50-208ENST00000430547 HSPB3Q12988 150 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 PRSS53Q2L4Q9 553 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 EIPR1Q53HC9 387 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 WIPI1Q5MNZ9 446 aaPredicted RBP16.05■□□□□ 0.16
NUP50-208ENST00000430547 NPSR1Q6W5P4 371 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 Q6ZSR9 355 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 MREGQ8N565 214 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 FAM83FQ8NEG4 500 aaPredicted RBP16.05■□□□□ 0.16
NUP50-208ENST00000430547 OR14L1PQ8NHC6 308 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 PPP1R14CQ8TAE6 165 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 EFHD2Q96C19 240 aaPredicted RBP16.05■□□□□ 0.16
NUP50-208ENST00000430547 PPCDCQ96CD2 204 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 PARD6BQ9BYG5 372 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 TUBB1Q9H4B7 451 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 Q9N2J8 555 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 SERHLQ9NQF3 203 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 MRTO4Q9UKD2 239 aaKnown RBP16.05■□□□□ 0.16
NUP50-208ENST00000430547 EXO1Q9UQ84 846 aaKnown RBP16.05■□□□□ 0.16
NUP50-208ENST00000430547 CAMK2AQ9UQM7 478 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 SLC6A5Q9Y345 797 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 WIF1Q9Y5W5 379 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 ADGRG4Q8IZF6 3080 aa16.05■□□□□ 0.16
NUP50-208ENST00000430547 A0A0G2JNJ9 132 aa16.04■□□□□ 0.16
NUP50-208ENST00000430547 TMEM114B3SHH9 223 aa16.04■□□□□ 0.16
NUP50-208ENST00000430547 UPK1AO00322 258 aa16.04■□□□□ 0.16
NUP50-208ENST00000430547 PIP5K1BO14986 540 aa16.04■□□□□ 0.16
NUP50-208ENST00000430547 LSM1O15116 133 aaKnown RBP16.04■□□□□ 0.16
NUP50-208ENST00000430547 RGS16O15492 202 aaPredicted RBP16.04■□□□□ 0.16
NUP50-208ENST00000430547 AKAP10O43572 662 aa16.04■□□□□ 0.16
NUP50-208ENST00000430547 TSPAN2O60636 221 aa16.04■□□□□ 0.16
NUP50-208ENST00000430547 DDX5P17844 614 aaKnown RBP16.04■□□□□ 0.16
NUP50-208ENST00000430547 MAPK1P28482 360 aa16.04■□□□□ 0.16
NUP50-208ENST00000430547 SSTR2P30874 369 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms