RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 CACNB2Q08289 660 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CAPSQ13938 189 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 HNF4GQ14541 408 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ANXA8L1Q5VT79 327 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SYPL2Q5VXT5 272 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 LCLAT1Q6UWP7 414 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 MBOAT1Q6ZNC8 495 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC29A4Q7RTT9 530 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 MSRB3Q8IXL7 192 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF687Q8N1G0 1237 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 RTL3Q8N8U3 475 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM185AQ8NFB2 350 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 MDGA1Q8NFP4 955 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 GNPDA2Q8TDQ7 276 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ST7LQ8TDW4 575 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 C12orf66Q96MD2 445 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CASD1Q96PB1 797 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 OR4K3Q96R72 315 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CCNL2Q96S94 520 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SEC11CQ9BY50 192 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ACTL8Q9H568 366 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ENAMQ9NRM1 1142 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SMCO4Q9NRQ5 59 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CYSLTR2Q9NS75 346 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 KLHL8Q9P2G9 620 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 USP3Q9Y6I4 520 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 MIA3Q5JRA6 1907 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 FNDC1Q4ZHG4 1894 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 GFYI3L273 518 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 WNT9AO14904 365 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZNF682O95780 498 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CST3P01034 146 aaPredicted RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ALPIP09923 528 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 LINC00614P0C842 121 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 GIFP27352 417 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 HCCSP53701 268 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 RBBP4Q09028 425 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ABHD18Q0P651 414 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 VGLL4Q14135 290 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 DOC2AQ14183 400 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC36A2Q495M3 483 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 AKIRIN2Q53H80 203 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 QSOX2Q6ZRP7 698 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 PLEKHH3Q7Z736 793 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ROBO4Q8WZ75 1007 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 MARS2Q96GW9 593 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 MESP1Q9BRJ9 268 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 ABHD16BQ9H3Z7 469 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 CACYBPQ9HB71 228 aaKnown RBP8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC25A37Q9NYZ2 338 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 NTMQ9P121 344 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 MGAT4CQ9UBM8 478 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC9A8Q9Y2E8 581 aa8.38□□□□□ -1.07
CDC42BPA-206ENST00000429440 SBF1O95248 1867 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 GLTPD2A6NH11 291 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 TMEM210A6NLX4 147 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 NUDT19A8MXV4 375 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 CASKO14936 926 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 TREHO43280 583 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 MT-ND4LP03901 98 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 SMPD1P17405 629 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 AKAP5P24588 427 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 HTR2AP28223 471 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 MPGP29372 298 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 RBMS1P29558 406 aaKnown RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 CSF2RBP32927 897 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 CASP9P55211 416 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 SEMG2Q02383 582 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 TNFRSF9Q07011 255 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 SKP2Q13309 424 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 TTLL9Q3SXZ7 439 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 ADGRF1Q5T601 910 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC22A10Q63ZE4 541 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 HEPHL1Q6MZM0 1159 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC30A6Q6NXT4 461 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 CD200R1LQ6Q8B3 271 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 FJX1Q86VR8 437 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 LRRC28Q86X40 367 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 SYNPOQ8N3V7 929 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 FAM46DQ8NEK8 389 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 CHST13Q8NET6 341 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 CD99L2Q8TCZ2 262 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 XAGE5Q8WWM1 108 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 ACOT11Q8WXI4 607 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 VOPP1Q96AW1 172 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 IFT27Q9BW83 186 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 AP5M1Q9H0R1 490 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 TSPAN10Q9H1Z9 355 aaPredicted RBP8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 ASCL3Q9NQ33 180 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 DZANK1Q9NVP4 752 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 NLGN3Q9NZ94 848 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 CLEC2DQ9UHP7 191 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 NEU3Q9UQ49 428 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 A0A1B0GUH1 482 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 A0A1W2PPE3 182 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 ZBTB42B2RXF5 422 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 MKRN2OSH3BPM6 223 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 SLC7A4O43246 635 aa8.37□□□□□ -1.07
CDC42BPA-206ENST00000429440 MFSD11O43934 449 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms