RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SPHK2Q9NRA0 654 aa8.32□□□□□ -1.08
CDH13-202ENST00000428848 SEMA3GQ9NS98 782 aa8.32□□□□□ -1.08
CDH13-202ENST00000428848 UCKL1Q9NWZ5 548 aa8.32□□□□□ -1.08
CDH13-202ENST00000428848 PTTG3PQ9NZH4 202 aa8.32□□□□□ -1.08
CDH13-202ENST00000428848 SPIN1Q9Y657 262 aaPredicted RBP8.32□□□□□ -1.08
CDH13-202ENST00000428848 COL4A3Q01955 1670 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ANKDD1BA6NHY2 528 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ANHXE9PGG2 379 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 BTN3A3O00478 584 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 NME6O75414 186 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 EPPINO95925 133 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ACP2P11117 423 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ACADLP28330 430 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PBLDP30039 288 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 BSGP35613 385 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 MMP12P39900 470 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 MAP2K3P46734 347 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 DAB2P98082 770 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 GINS1Q14691 196 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 KLHL22Q53GT1 634 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ARSIQ5FYB1 569 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 LCN1P1Q5VSP4 162 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 METAP1DQ6UB28 335 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 TEX261Q6UWH6 196 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 LCTLQ6UWM7 567 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ARSKQ6UWY0 536 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PAMR1Q6UXH9 720 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 NRSN1Q8IZ57 195 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 LINC00471Q8N535 108 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 SYT14Q8NB59 555 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 NLGN4YQ8NFZ3 816 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 TMEM163Q8TC26 289 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PHOSPHO2Q8TCD6 241 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 WFIKKN2Q8TEU8 576 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 MYLIPQ8WY64 445 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 SMPDL3AQ92484 453 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 TRIM43Q96BQ3 446 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 PAWRQ96IZ0 340 aaKnown RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 LRR1Q96L50 414 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ABCG4Q9H172 646 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 MTIF3Q9H2K0 278 aaKnown RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 RHBGQ9H310 441 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 TRIM45Q9H8W5 580 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 ANKRA2Q9H9E1 313 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ERVMER34-1Q9H9K5 563 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PRM3Q9NNZ6 103 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ZC4H2Q9NQZ6 224 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 RBFOX1Q9NWB1 397 aaKnown RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 MARK1Q9P0L2 795 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PHF11Q9UIL8 331 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 FBXW2Q9UKT8 454 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 NDRG2Q9UN36 371 aaKnown RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 U3KQ87 197 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 TRDV1A0A1B0GX56 115 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PRODHO43272 600 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 LRRTM2O43300 516 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PI15O43692 258 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 SULT1B1O43704 296 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 SLC43A1O75387 559 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 CSF2P04141 144 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 EPHX1P07099 455 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 POU2F2P09086 479 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 TSPAN19P0C672 248 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ACRP10323 421 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 TYRP14679 529 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 GJA1P17302 382 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 BTF3P20290 206 aaKnown RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 PTBP1P26599 531 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDH13-202ENST00000428848 WEE1P30291 646 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 GABRA5P31644 462 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 CTNNB1P35222 781 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 MANFP55145 182 aaKnown RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 CLDN20P56880 219 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ST8SIA6P61647 398 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PPP3R1P63098 170 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 LSM11P83369 360 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDH13-202ENST00000428848 RAB40BQ12829 278 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PIN1Q13526 163 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 AANATQ16613 207 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PYDC2Q56P42 97 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 CLLU1Q5K131 121 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 OR2G6Q5TZ20 316 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 SHEQ5VZ18 495 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 TYW3Q6IPR3 259 aaKnown RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PSRC1Q6PGN9 363 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 GPAT4Q86UL3 456 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 PDZD3Q86UT5 571 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ADGRG3Q86Y34 549 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 CFAP206Q8IYR0 622 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ZNF680Q8NEM1 530 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ATP6V1C2Q8NEY4 427 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 VN1R2Q8NFZ6 395 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 OR8K5Q8NH50 307 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 OR52P1PQ8NH57 321 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 AP3S1Q92572 193 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 TMEM203Q969S6 136 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 ZBED6CLQ96FA7 236 aaPredicted RBP8.31□□□□□ -1.08
CDH13-202ENST00000428848 MSANTD3Q96H12 275 aa8.31□□□□□ -1.08
CDH13-202ENST00000428848 LINC00615Q96LM1 132 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms