RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 MSRAQ9UJ68 235 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 NDRG4Q9ULP0 352 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 TMCC3Q9ULS5 477 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 CSNK1G3Q9Y6M4 447 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 KIAA1549LQ6ZVL6 1849 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 MRPL3P09001 348 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 CLEC2LP0C7M8 214 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 CPN2P22792 545 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ATP5A1P25705 553 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 AMZ1Q400G9 498 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FAAH2Q6GMR7 532 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 TYW3Q6IPR3 259 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 DGAT2L6Q6ZPD8 337 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 IKBIPQ70UQ0 350 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ABI3BPQ7Z7G0 1075 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 OXR1Q8N573 874 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 CYB561A3Q8NBI2 242 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 NUP43Q8NFH3 380 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 OR7G2Q8NG99 324 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 OR9A4Q8NGU2 314 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 CREB3L4Q8TEY5 395 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FAM3CQ92520 227 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 RAB7BQ96AH8 199 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 PIP5K1AQ99755 562 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ENKD1Q9H0I2 346 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ATP13A2Q9NQ11 1180 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 SNTG1Q9NSN8 517 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 PCDH15Q96QU1 1955 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 DSPP15924 2871 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 ARID1AO14497 2285 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FAM171A2A8MVW0 826 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ADAMDEC1O15204 470 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 HRO43593 1189 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 PRKYO43930 277 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 MRPS14O60783 128 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 CNOT3O75175 753 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 RDH16O75452 317 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 MFN2O95140 757 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 EPPINO95925 133 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 C5AR1P21730 350 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 UQCRC2P22695 453 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ATP6V1E1P36543 226 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 HCCSP53701 268 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 TAS2R41P59536 307 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FUT5Q11128 374 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ZNF846Q147U1 533 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 SNAPC1Q16533 368 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 HYAL4Q2M3T9 481 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 CRB2Q5IJ48 1285 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ZNF311Q5JNZ3 666 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FAM69BQ5VUD6 431 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FBXO42Q6P3S6 717 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 RRM2BQ7LG56 351 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 PRICKLE2Q7Z3G6 844 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 VN1R4Q7Z5H5 301 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ZER1Q7Z7L7 766 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 CAMKK1Q8N5S9 505 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 BBS1Q8NFJ9 593 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 OR4K5Q8NGD3 323 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 SUN3Q8TAQ9 357 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ZNF675Q8TD23 568 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 GATAD2BQ8WXI9 593 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ZBED6CLQ96FA7 236 aaPredicted RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 TRMT61AQ96FX7 289 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 LMF1Q96S06 567 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 TM9SF2Q99805 663 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 HDAC8Q9BY41 377 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 DUSP21Q9H596 190 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 TMEM38AQ9H6F2 299 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 SYNDIG1Q9H7V2 258 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 CCNB1IP1Q9NPC3 277 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 DDX28Q9NUL7 540 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 EVA1BQ9NVM1 165 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 GDE1Q9NZC3 331 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ANKMY1Q9P2S6 941 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ENTPD4Q9Y227 616 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 A0A0A6YYC8 382 aaPredicted RBP7.85□□□□□ -1.15
CD44-208ENST00000428726 C2CD4DB7Z1M9 353 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 I3L1I5 382 aaPredicted RBP7.85□□□□□ -1.15
CD44-208ENST00000428726 IMPA2O14732 288 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 UGT2B17O75795 530 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 NCR1O76036 304 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 ZIC2O95409 532 aaPredicted RBP7.85□□□□□ -1.15
CD44-208ENST00000428726 KRT75O95678 551 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 IFNA14P01570 189 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 RPN2P04844 631 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 ARAFP10398 606 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 ALAS2P22557 587 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 MMP11P24347 488 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 SERPINB1P30740 379 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 SOX18P35713 384 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 LTBRP36941 435 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 HSD17B2P37059 387 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 RUNX2Q13950 521 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 OXA1LQ15070 435 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 KLHL12Q53G59 568 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 RNASE12Q5GAN4 147 aaKnown RBP7.85□□□□□ -1.15
CD44-208ENST00000428726 ZMAT1Q5H9K5 638 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 STEAP3Q658P3 488 aa7.85□□□□□ -1.15
CD44-208ENST00000428726 ABHD17CQ6PCB6 329 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms