RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 GMNNO75496 209 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 TNFRSF21O75509 655 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 CIB2O75838 187 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 STAMBPO95630 424 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 NR2F1P10589 423 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ICAM2P13598 275 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ATP6V1C1P21283 382 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ME2P23368 584 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ITGA3P26006 1051 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 AQP1P29972 269 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 MSX2P35548 267 aaPredicted RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 PPICP45877 212 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 MAN2A2P49641 1150 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 GPR143P51810 404 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 NR0B1P51843 470 aaKnown RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 RRADP55042 308 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 NRG3P56975 720 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 DCAF7P61962 342 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 AP2B1P63010 937 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 KCNJ2P63252 427 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 RNF4P78317 190 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 POU6F2P78424 691 aaPredicted RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 PLCXD2Q0VAA5 305 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 BNIP2Q12982 314 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 GNA13Q14344 377 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 MYBPC3Q14896 1274 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF630Q2M218 657 aaPredicted RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 SPATS1Q496A3 300 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 GPAT3Q53EU6 434 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 PIGGQ5H8A4 983 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 RPS26P11Q5JNZ5 115 aaPredicted RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 DCST2Q5T1A1 773 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 CCNJQ5T5M9 372 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 BROXQ5VW32 411 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ERICH5Q6P6B1 374 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 UNQ6494/PRO21346Q6UXR6 183 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 NET1Q7Z628 596 aaPredicted RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 GALNT10Q86SR1 603 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 CALHM3Q86XJ0 350 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 HPS6Q86YV9 775 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 SPACA3Q8IXA5 215 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZZZ3Q8IYH5 903 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 MICU2Q8IYU8 434 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 FBXW8Q8N3Y1 598 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 SLC5A8Q8N695 610 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZSCAN1Q8NBB4 408 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 CLEC1AQ8NC01 280 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 OR5L2Q8NGL0 311 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 OR8K3Q8NH51 312 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 NFKBIDQ8NI38 313 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 NUBPLQ8TB37 319 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 PIK3R3Q92569 461 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 LCORQ96JN0 433 aaPredicted RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF583Q96ND8 569 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 RAB3IPQ96QF0 476 aaPredicted RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 STACQ99469 402 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 BTBD2Q9BX70 525 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 SEMA4CQ9C0C4 833 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 PIGUQ9H490 435 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 CACYBPQ9HB71 228 aaKnown RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 A4GALTQ9NPC4 353 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 DUSP22Q9NRW4 184 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 SUCOQ9UBS9 1254 aaKnown RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 USP22Q9UPT9 525 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 POLHQ9Y253 713 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 GPR55Q9Y2T6 319 aaPredicted RBP7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 RAXQ9Y2V3 346 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 PCDHGB3Q9Y5G1 929 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 KCNE3Q9Y6H6 103 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 CHD6Q8TD26 2715 aa7.33□□□□□ -1.24
HMGA1P4-201ENST00000428643 ELOVL7A1L3X0 281 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CFAP73A6NFT4 308 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 C1QTNF9BB2RNN3 333 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 WWP2O00308 870 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ACOX3O15254 700 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 EFSO43281 561 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 SORBS2O94875 1100 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 NKX2-2O95096 273 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 H6PDO95479 791 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 AK1P00568 194 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TFPTP0C1Z6 253 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 C1QTNF9P0C862 333 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CT45A8P0DMV1 189 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CT45A9P0DMV2 189 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ARAFP10398 606 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 ITGAMP11215 1152 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 BMP2P12643 396 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 HSD17B1P14061 328 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 NCK1P16333 377 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 DRD5P21918 477 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 IL12BP29460 328 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 TRHRP34981 398 aaPredicted RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 KRT20P35900 424 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CRISP3P54108 245 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 PSPHP78330 225 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 MRPS22P82650 360 aaKnown RBP7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 CDK6Q00534 326 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 PSG6Q00889 435 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 RBBP4Q09028 425 aa7.32□□□□□ -1.24
HMGA1P4-201ENST00000428643 Q0VFX4 171 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms