RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PCGF2P35227 344 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 MEF2AQ02078 507 aaPredicted RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 GSG1Q2KHT4 349 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 ARHGAP15Q53QZ3 475 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 C3orf38Q5JPI3 329 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 NHLRC3Q5JS37 347 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 DCST1Q5T197 706 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 C17orf99Q6UX52 265 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 SAMD14Q8IZD0 417 aaPredicted RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 CLRN3Q8NCR9 226 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 OR4D9Q8NGE8 314 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 OR8J1Q8NGP2 316 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 ERMAPQ96PL5 475 aaPredicted RBP10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 OR4K3Q96R72 315 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 DPAGT1Q9H3H5 408 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 NT5DC2Q9H857 520 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 CRLS1Q9UJA2 301 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 SESN1Q9Y6P5 492 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 ENPP4Q9Y6X5 453 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 DOCK4Q8N1I0 1966 aa10.65□□□□□ -0.7
SEC61A1-202ENST00000424880 TRBV23-1A0A0A0MS06 115 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 FAM183AA6NL82 134 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 E7EQ34 232 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 L7N2F9 121 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 SGK494L7N484 410 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 MPZL2O60487 215 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 TFP02787 698 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 WNT1P04628 370 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 EPHX1P07099 455 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 LIMS3P0CW19 117 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 LIMS4P0CW20 117 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 TBXA2RP21731 343 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 VEGFCP49767 419 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 GCNT6Q5T4J0 391 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC22A8Q8TCC7 542 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 DPYSL5Q9BPU6 564 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 AUNIPQ9H7T9 357 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 MRTO4Q9UKD2 239 aaKnown RBP10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 ST3GAL5Q9UNP4 418 aa10.65□□□□□ -0.71
SEC61A1-202ENST00000424880 ZSWIM8A7E2V4 1837 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 ARID1AO14497 2285 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 A8MXK9 166 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 M0R3H8 397 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 SCAMP2O15127 329 aaKnown RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 OR56A5P0C7T3 313 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 PIPP12273 146 aaPredicted RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 CBR1P16152 277 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 PTBP1P26599 531 aaKnown RBP eCLIP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 AOAHP28039 575 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 SERTAD2Q14140 314 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 PRSS53Q2L4Q9 553 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC25A35Q3KQZ1 300 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 HSD17B12Q53GQ0 312 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 TMEM255AQ5JRV8 349 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 OR5M10Q6IEU7 315 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 RGS7BPQ6MZT1 257 aaPredicted RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 SERPINA13PQ6UXR4 307 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 BBS1Q8NFJ9 593 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 OR5T2Q8NGG2 359 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 GEMIN6Q8WXD5 167 aaKnown RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 THAP4Q8WY91 577 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 LRRC46Q96FV0 321 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 ZNF436Q9C0F3 470 aaPredicted RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 FZD3Q9NPG1 666 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 ABT1Q9ULW3 272 aaKnown RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 SYNDIG1LA6NDD5 238 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 DNASE2O00115 360 aaPredicted RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 NME6O75414 186 aaPredicted RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 TGM6O95932 706 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 APOC1P02654 83 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 H2AFB2P0C5Z0 115 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 XPAP23025 273 aaPredicted RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 ELAVL4P26378 380 aaKnown RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 CAMK1Q14012 370 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 CHRNA6Q15825 494 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC36A2Q495M3 483 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 TCTN3Q6NUS6 607 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 WRAP53Q9BUR4 548 aaKnown RBP10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 GSDMCQ9BYG8 508 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 OSGEPL1Q9H4B0 414 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 PDFQ9HBH1 243 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 IL26Q9NPH9 171 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 IL17CQ9P0M4 197 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 MLXQ9UH92 298 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 NOD1Q9Y239 953 aa10.64□□□□□ -0.71
SEC61A1-202ENST00000424880 MBLAC1A4D2B0 266 aaPredicted RBP10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 OR6C74A6NCV1 312 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 IGF2P01344 180 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 IDSP22304 550 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 CCR7P32248 378 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 LIMS1P48059 325 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 UPP1Q16831 310 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 ELP2Q6IA86 826 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC25A25Q6KCM7 469 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 IQCHQ86VS3 1027 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 COMTD1Q86VU5 262 aa10.63□□□□□ -0.71
SEC61A1-202ENST00000424880 TMEM86AQ8N2M4 240 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms