RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SSR2P43308 183 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 CLDN20P56880 219 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 CRADDP78560 199 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 CHRNEQ04844 493 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SPOCK1Q08629 439 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 BIKQ13323 160 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SP140Q13342 867 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SNTA1Q13424 505 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SLBPQ14493 270 aaKnown RBP eCLIP5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SLMAPQ14BN4 828 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 FAM189A2Q15884 450 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 OCLNQ16625 522 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 PCID2Q5JVF3 399 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 GTF2IRD2BQ6EKJ0 949 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 LRRC8EQ6NSJ5 796 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF549Q6P9A3 640 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 CES3Q6UWW8 571 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 TMIGD1Q6UXZ0 262 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 Q6ZSR9 355 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 GTF2IRD2Q86UP8 949 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 RHOT2Q8IXI1 618 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 GALNT12Q8IXK2 581 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 KATNAL2Q8IYT4 538 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 ST13P4Q8IZP2 240 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-203ENST00000424270 OR52B6Q8NGF0 335 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 GIMAP7Q8NHV1 300 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 PEX13Q92968 403 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 OMA1Q96E52 524 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SORCS2Q96PQ0 1159 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 KCNC2Q96PR1 638 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 OR4K3Q96R72 315 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 TCF12Q99081 682 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 INPP5KQ9BT40 448 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 C1QTNF5Q9BXJ0 243 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 SLITRK2Q9H156 845 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 TSPY26PQ9H489 355 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 RPF2Q9H7B2 306 aaKnown RBP5.59□□□□□ -1.51
SDCBP-203ENST00000424270 FKRPQ9H9S5 495 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 LYRM4Q9HD34 91 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 GLRX2Q9NS18 164 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 PPP4R1LQ9P1A2 415 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF337Q9Y3M9 751 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 CORINQ9Y5Q5 1042 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 KCNE2Q9Y6J6 123 aa5.59□□□□□ -1.51
SDCBP-203ENST00000424270 MED12Q93074 2177 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 AKR1B10O60218 316 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 GMFGO60234 142 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 KERAO60938 352 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 SH3BGRLO75368 114 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 REM1O75628 298 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 TJP3O95049 919 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 PNPP00491 289 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 DAOP14920 347 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 PTAFRP25105 342 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 NMBRP28336 390 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 AGTR1P30556 359 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 GRIA1P42261 906 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 SLC6A8P48029 635 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 DSCR4P56555 118 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-203ENST00000424270 UBE2HP62256 183 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 HMGCS1Q01581 520 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 POU4F1Q01851 419 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 DHX9Q08211 1270 aaKnown RBP5.58□□□□□ -1.52
SDCBP-203ENST00000424270 RASGEF1BQ0VAM2 473 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 STX5Q13190 355 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 ITGADQ13349 1161 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 THOC5Q13769 683 aaKnown RBP5.58□□□□□ -1.52
SDCBP-203ENST00000424270 AP5B1Q2VPB7 878 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 LGSNQ5TDP6 509 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 ZNF470Q6ECI4 717 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 UGT3A1Q6NUS8 523 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 Q6ZPA2 131 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 SPATA19Q7Z5L4 167 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 EXOC3L1Q86VI1 746 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 THOC6Q86W42 341 aaKnown RBP5.58□□□□□ -1.52
SDCBP-203ENST00000424270 RELL1Q8IUW5 271 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 ZDHHC22Q8N966 263 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 OR8K1Q8NGG5 319 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 OR52N5Q8NH56 324 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 OR51F2Q8NH61 342 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 FAM110DQ8TAY7 271 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-203ENST00000424270 EEF1AKMT1Q8WVE0 214 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 ANKRD7Q92527 254 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 KCNJ9Q92806 393 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 TANKQ92844 425 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 MTBPQ96DY7 904 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 VPS39Q96JC1 886 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 F2RL3Q96RI0 385 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 EGFL8Q99944 293 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 AICDAQ9GZX7 198 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 RAB1BQ9H0U4 201 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 KCNF1Q9H3M0 494 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 PTGES2Q9H7Z7 377 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 FN3KRPQ9HA64 309 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 ESM1Q9NQ30 184 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 PDP1Q9P0J1 537 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-203ENST00000424270 SLC17A6Q9P2U8 582 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 BCAP29Q9UHQ4 241 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 MCM8Q9UJA3 840 aa5.58□□□□□ -1.52
SDCBP-203ENST00000424270 MOKQ9UQ07 419 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms