RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 MAD2L1BPQ15013 274 aaPredicted RBP10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 NKAPLQ5M9Q1 402 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 HES5Q5TA89 166 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 OR2G6Q5TZ20 316 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 METTL2BQ6P1Q9 378 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 TMEM53Q6P2H8 277 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 WASH2PQ6VEQ5 465 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 HACD2Q6Y1H2 254 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 EGFL6Q8IUX8 553 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 FUNDC1Q8IVP5 155 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 CCDC36Q8IYA8 594 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 CSNK1A1LQ8N752 337 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 B3GNT7Q8NFL0 401 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 ITFG2Q969R8 447 aa10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 ZNF300Q96RE9 604 aaPredicted RBP10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 AK6Q9Y3D8 172 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-208ENST00000422704 LOC285095A0A1B0GVY8 99 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 MEIS3P1A6NDR6 274 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ZNF208O43345 1280 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 AGR2O95994 175 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 MAGEA8P43361 318 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RAB28P51157 221 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 SELENOWP63302 87 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 CST6Q15828 149 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 MAPK14Q16539 360 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 NTRK2Q16620 822 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 TMEM69Q5SWH9 247 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 DESI1Q6ICB0 168 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 FAM86B1Q8N7N1 296 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 SLC25A44Q96H78 314 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 MS4A4AQ96JQ5 239 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 HIST1H2AAQ96QV6 131 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 OR10A4Q9H209 315 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 SDHAF3Q9NRP4 125 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 INTS6Q9UL03 887 aaKnown RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 PCDHGB6Q9Y5F9 930 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 OTOFQ9HC10 1997 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 TCRBV5S1A1TA0A578 114 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 YY2O15391 372 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 HOXD9P28356 352 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ZNF140P52738 457 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 TAS2R38P59533 333 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RELAQ04206 551 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 GALNT1Q10472 559 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 SPCS2Q15005 226 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 SGCAQ16586 387 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ABCA11PQ4W5N1 156 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 XKRXQ6PP77 449 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 LRRC25Q8N386 305 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 SLC17A9Q9BYT1 436 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ARL6Q9H0F7 186 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 UPB1Q9UBR1 384 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 USP3Q9Y6I4 520 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 NOTCH3Q9UM47 2321 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 UNCXA6NJT0 531 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 M0R233 179 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 IFNA7P01567 189 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 PEPDP12955 493 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ZNF16P17020 682 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 JUNDP17535 347 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 APOFQ13790 326 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ERV3-1Q14264 604 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 UGT3A2Q3SY77 523 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ANKRD34AQ69YU3 496 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 OR4C11Q6IEV9 310 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 BCDIN3DQ7Z5W3 292 aaKnown RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 OR2T11Q8NH01 316 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 OR56A3Q8NH54 315 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RPLP0P6Q8NHW5 317 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 GNPDA2Q8TDQ7 276 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 UBXN10Q96LJ8 280 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RBP7Q96R05 134 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 PPIL3Q9H2H8 161 aaKnown RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 TUBB1Q9H4B7 451 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RNF121Q9H920 327 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ZNF304Q9HCX3 659 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 CUEDC1Q9NWM3 386 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 CEPT1Q9Y6K0 416 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 A0A1W2PPL8 197 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 TCRBV21S2A2A0A5A6 115 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 CDC14CA4D256 554 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 METTL21EPA6NDL7 271 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 CYB5AP00167 134 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 APOC3P02656 99 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 SFTPBP07988 381 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 LIPCP11150 499 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 PRKCAP17252 672 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 PSMB10P40306 273 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RAB15P59190 212 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 MCCD1P59942 119 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RPS21P63220 83 aaKnown RBP10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 E2F1Q01094 437 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RUNX3Q13761 415 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 KCNC3Q14003 757 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 RAB33AQ14088 237 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 TP53I3Q53FA7 332 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 CTSL3PQ5NE16 218 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 PLEKHG7Q6ZR37 379 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 NATD1Q8N6N6 113 aa10.05□□□□□ -0.8
SEMA4D-208ENST00000422704 ATG5Q9H1Y0 275 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms