RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 DOHHQ9BU89 302 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CRB3Q9BUF7 120 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 DDA1Q9BW61 102 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CHID1Q9BWS9 393 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ALOXE3Q9BYJ1 711 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ULBP3Q9BZM4 244 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 TGIF2Q9GZN2 237 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 RUBCNLQ9H714 662 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 REEP1Q9H902 201 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 WDR54Q9H977 334 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 FOLH1BQ9HBA9 442 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 BCL2L10Q9HD36 194 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 POLE3Q9NRF9 147 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 THSD1Q9NS62 852 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 FAM86C1Q9NVL1 165 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 GIN1Q9NXP7 522 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 KLHL28Q9NXS3 571 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 SLC39A1Q9NY26 324 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 DNAJB9Q9UBS3 223 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ERVK-11Q9UQG0 969 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 WDR45Q9Y484 360 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 OR10H1Q9Y4A9 318 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 PCDHGA8Q9Y5G5 932 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 ORC6Q9Y5N6 252 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 HEMK1Q9Y5R4 338 aaPredicted RBP5.56□□□□□ -1.52
HMGB3-202ENST00000419110 CLCA3PQ9Y6N3 262 aa5.56□□□□□ -1.52
HMGB3-202ENST00000419110 DSPPQ9NZW4 1301 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 IGLV3-12A0A075B6K2 115 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 A0A0G2JPF8 293 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 TCRBV16S1A1N1A0A5B0 115 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SAGE2PA6NJ88 616 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PCNX2A6NKB5 2137 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 OR6C76A6NM76 312 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 A8MVJ9 347 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 HNRNPCL2B2RXH8 293 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 HNRNPCL3B7ZW38 293 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 hCG_2039718K7EN88 272 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SYT5O00445 386 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PCDH17O14917 1159 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CLOCKO15516 846 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 BRINP1O60477 761 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CBFA2T3O75081 653 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 DNAJB6O75190 326 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 STX11O75558 287 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 JRKO75564 520 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 UGT2B17O75795 530 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 NKX2-2O95096 273 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PGM3O95394 542 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 TIAF1O95411 115 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 H6PDO95479 791 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CBX7O95931 251 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 HPRP00739 348 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CST1P01037 141 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 C1QCP02747 245 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ALBP02768 609 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SEMG1P04279 462 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 KLK3P07288 261 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 THBS1P07996 1170 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CHRM4P08173 479 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 TFPTP0C1Z6 253 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CT62P0C5K7 136 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 HNRNPCL4P0DMR1 293 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ACADSP16219 412 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CDH2P19022 906 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 TRHRP34981 398 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 RORAP35398 523 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 GCKP35557 465 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PSMD4P55036 377 aaKnown RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 AQP4P55087 323 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 RGS8P57771 180 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SPIBQ01892 262 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 MAP4K2Q12851 820 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 GK3PQ14409 553 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF267Q14586 743 aaPredicted RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 MYBPC3Q14896 1274 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 LARS2Q15031 903 aaKnown RBP5.55□□□□□ -1.52
HMGB3-202ENST00000419110 NCF4Q15080 339 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 NSDHLQ15738 373 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SYPL1Q16563 259 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 NKG7Q16617 165 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 DUSP5Q16690 384 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 LRRC36Q1X8D7 754 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 ISXQ2M1V0 245 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 LIN52Q52LA3 116 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 CMPK2Q5EBM0 449 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 DCAF12Q5T6F0 453 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 HES3Q5TGS1 186 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 STPG1Q5TH74 334 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 TMEM164Q5U3C3 297 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 PRAMEF17Q5VTA0 474 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 MLIPQ5VWP3 458 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 HLA-DQA1Q5Y7H0 255 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 OR2T5Q6IEZ7 315 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 HEPHL1Q6MZM0 1159 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 HMBOX1Q6NT76 420 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 FAM198BQ6UWH4 519 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 RAB11FIP2Q7L804 512 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 SLC29A4Q7RTT9 530 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 VTCN1Q7Z7D3 282 aa5.55□□□□□ -1.52
HMGB3-202ENST00000419110 AMIGO2Q86SJ2 522 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms