RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NRGNQ92686 78 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 RNF166Q96A37 237 aaPredicted RBP13.76□□□□□ -0.21
UBXN4-203ENST00000416538 SLC35A4Q96G79 324 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 WDYHV1Q96HA8 205 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 ANKZF1Q9H8Y5 726 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 MYNNQ9NPC7 610 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 OXSMQ9NWU1 459 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 FLRT3Q9NZU0 649 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 PRODH2Q9UF12 536 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 FBXL2Q9UKC9 423 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 PSME2Q9UL46 239 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 PRRC2AP48634 2157 aaKnown RBP13.75□□□□□ -0.21
UBXN4-203ENST00000416538 OR6C70A6NIJ9 312 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 MYO1GB0I1T2 1018 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 PLOD3O60568 738 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 PSMG1O95456 288 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 JUNP05412 331 aaKnown RBP13.75□□□□□ -0.21
UBXN4-203ENST00000416538 ZNF136P52737 540 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 GAS1P54826 345 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 DNAJB13P59910 316 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 PSG6Q00889 435 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 SLC18A2Q05940 514 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 KIAA0040Q15053 153 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 TOMM20Q15388 145 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 SLC25A35Q3KQZ1 300 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 SPDYAQ5MJ70 313 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 SLC30A6Q6NXT4 461 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 TRIM46Q7Z4K8 759 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 CDH24Q86UP0 819 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 OR1J4Q8NGS1 313 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 CCDC126Q96EE4 140 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 EGLN2Q96KS0 407 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 ADOQ96SZ5 270 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 SH3GL2Q99962 352 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 G6PC3Q9BUM1 346 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 OR2B2Q9GZK3 357 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 KLRF1Q9NZS2 232 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 CAMK2AQ9UQM7 478 aa13.75□□□□□ -0.21
UBXN4-203ENST00000416538 REM1O75628 298 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 RSL1D1O76021 490 aaKnown RBP13.74□□□□□ -0.21
UBXN4-203ENST00000416538 EPPINO95925 133 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 DCAF7P61962 342 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 RPP38P78345 283 aaKnown RBP13.74□□□□□ -0.21
UBXN4-203ENST00000416538 C2orf80Q0P641 193 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 HEPACAMQ14CZ8 416 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 TESK1Q15569 626 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 CCDC153Q494R4 210 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 ZNF385BQ569K4 471 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 TMEM107Q6UX40 140 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 LACC1Q8IV20 430 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 C10orf107Q8IVU9 208 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 RDH11Q8TC12 318 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 EFHD2Q96C19 240 aaPredicted RBP13.74□□□□□ -0.21
UBXN4-203ENST00000416538 ERP27Q96DN0 273 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 COL21A1Q96P44 957 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 GATA5Q9BWX5 397 aaPredicted RBP13.74□□□□□ -0.21
UBXN4-203ENST00000416538 RTN4RQ9BZR6 473 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 TUBB1Q9H4B7 451 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 GLIPR2Q9H4G4 154 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 ITGB1BP2Q9UKP3 347 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 WIF1Q9Y5W5 379 aa13.74□□□□□ -0.21
UBXN4-203ENST00000416538 TMEM233B4DJY2 109 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 CPA3P15088 417 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 KRT4P19013 534 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 BMP5P22003 454 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 ARRB2P32121 409 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 NCBP2P52298 156 aaKnown RBP eCLIP13.73□□□□□ -0.211e-8■□□□□ 9.5
UBXN4-203ENST00000416538 ZNF155Q12901 538 aaPredicted RBP13.73□□□□□ -0.21
UBXN4-203ENST00000416538 SNTA1Q13424 505 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 IMPG1Q17R60 797 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 ERCC6LQ2NKX8 1250 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 LIPMQ5VYY2 423 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 NSUN5P2Q63ZY6 315 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 OR5M10Q6IEU7 315 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 ANKRD26P1Q6NSI1 321 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 NOXRED1Q6NXP6 359 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 C9orf106Q8NAJ2 232 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 ABTB1Q969K4 478 aaPredicted RBP13.73□□□□□ -0.21
UBXN4-203ENST00000416538 TRIM44Q96DX7 344 aaPredicted RBP13.73□□□□□ -0.21
UBXN4-203ENST00000416538 FCRL1Q96LA6 429 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 AMDHD1Q96NU7 426 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 GIMAP4Q9NUV9 329 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 KCNN3Q9UGI6 736 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 GRID1Q9ULK0 1009 aa13.73□□□□□ -0.21
UBXN4-203ENST00000416538 CCDC151A5D8V7 595 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 MBD3L4A6NDZ8 208 aaPredicted RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 MBD3L3A6NE82 208 aaPredicted RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 MBD3L5A6NJ08 208 aaPredicted RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 CD8B2A6NJW9 211 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 AHRRA9YTQ3 701 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 NPIPB8E9PQR5 432 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 UPK1AO00322 258 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 COPEO14579 308 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 CDH16O75309 829 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 CHRNGP07510 517 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 UROSP10746 265 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 CYP4B1P13584 511 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 TCEA1P23193 301 aaKnown RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 PRPH2P23942 346 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 TIMP3P35625 211 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms