RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 FAM126AQ9BYI3 521 aaPredicted RBP7.42□□□□□ -1.22
SIK3-203ENST00000415541 MFSD1Q9H3U5 465 aa7.42□□□□□ -1.22
SIK3-203ENST00000415541 RERGLQ9H628 205 aa7.42□□□□□ -1.22
SIK3-203ENST00000415541 C14orf105Q9NVL8 296 aa7.42□□□□□ -1.22
SIK3-203ENST00000415541 TXNL4BQ9NX01 149 aaKnown RBP7.42□□□□□ -1.22
SIK3-203ENST00000415541 LOC105369274A0A096LPK9 316 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 TNFRSF11BO00300 401 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 WNT9AO14904 365 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SLC28A2O43868 658 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ATG12O94817 140 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ABLIM3O94929 683 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 DIRAS1O95057 198 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SERPINA3P01011 423 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ACAA1P09110 424 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 G6PDP11413 515 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 PIPP12273 146 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 SPAM1P38567 509 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 CRYBB2P43320 205 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 CDKN1CP49918 316 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 SMSP52788 366 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SGCGQ13326 291 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SNTB1Q13884 538 aaKnown RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 GPNMBQ14956 572 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 EIF2S3LQ2VIR3 472 aaKnown RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 SPDYE7PQ495Y7 208 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 TCTE1Q5JU00 501 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ZNF648Q5T619 568 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 GPRC6AQ5T6X5 926 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 OR4N4Q8N0Y3 316 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 GLYATL2Q8WU03 294 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 RAB7BQ96AH8 199 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 TMEM41AQ96HV5 264 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ZC3H10Q96K80 434 aaKnown RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 OR52E6Q96RD3 313 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SPHK2Q9NRA0 654 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 NDUFB11Q9NX14 153 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 KCMF1Q9P0J7 381 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 PLEKHB1Q9UF11 243 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 SLC6A14Q9UN76 642 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SCN10AQ9Y5Y9 1956 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 TCRBV16S1A1N1A0A5B0 115 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 DRGXA6NNA5 263 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 POM121CA8CG34 1229 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 CD63P08962 238 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ADH5P11766 374 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 NFYAP23511 347 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 GDI1P31150 447 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ZFP36L2P47974 494 aaKnown RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 CLCN7P51798 805 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 RNF4P78317 190 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 CACNG1Q06432 222 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 LRRC74AQ0VAA2 488 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SLC14A2Q15849 920 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 CPSF6Q16630 551 aaKnown RBP eCLIP7.41□□□□□ -1.22
SIK3-203ENST00000415541 HFEQ30201 348 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 CRTC2Q53ET0 693 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 XKR7Q5GH72 579 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 TMEM240Q5SV17 173 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 PRAMEF13Q5VWM6 474 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ALKBH2Q6NS38 261 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 C22orf39Q6P5X5 142 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 IL27RAQ6UWB1 636 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ALKAL2Q6UX46 152 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 TSPAN33Q86UF1 283 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 PDZD3Q86UT5 571 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 OR10Q1Q8NGQ4 319 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 TCTEX1D2Q8WW35 142 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 OR8D1Q8WZ84 308 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 NR4A3Q92570 626 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SCAMP4Q969E2 229 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 TMEM68Q96MH6 324 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 NELL2Q99435 816 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 KCNJ15Q99712 375 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SSX3Q99909 188 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 MAPKAP1Q9BPZ7 522 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 GSDMCQ9BYG8 508 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SAP130Q9H0E3 1048 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ZNF275Q9NSD4 429 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 POLR3HQ9Y535 204 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 F11P03951 625 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ALDOBP05062 364 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SULT1A3P0DMM9 295 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SULT1A4P0DMN0 295 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 PPP3CBP16298 524 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 GABRB1P18505 474 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 RAG2P55895 527 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 CHAF1BQ13112 559 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 LRRC32Q14392 662 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 MICBQ29980 383 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 FAM174BQ3ZCQ3 159 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 Q6ZVL8 140 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 USP30Q70CQ3 517 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 USP53Q70EK8 1073 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 SKA3Q8IX90 412 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 PGBD5Q8N414 524 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 OR10G2Q8NGC3 310 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 ARRDC2Q8TBH0 407 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 NSUN5Q96P11 429 aaKnown RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 GINS4Q9BRT9 223 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms