RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 COL21A1Q96P44 957 aa18.39■□□□□ 0.53
CTTN-205ENST00000415461 ADOQ96SZ5 270 aa18.39■□□□□ 0.53
CTTN-205ENST00000415461 TRMOQ9BU70 441 aa18.39■□□□□ 0.53
CTTN-205ENST00000415461 GLIPR2Q9H4G4 154 aa18.39■□□□□ 0.53
CTTN-205ENST00000415461 C1orf109Q9NX04 203 aa18.39■□□□□ 0.53
CTTN-205ENST00000415461 Q9UFV3 132 aa18.39■□□□□ 0.53
CTTN-205ENST00000415461 AKAP9Q99996 3911 aa18.39■□□□□ 0.53
CTTN-205ENST00000415461 OR6C70A6NIJ9 312 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 NPIPB8E9PQR5 432 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 SLC28A1O00337 649 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 ICOSLGO75144 302 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 GABRA1P14867 456 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 CREB1P16220 341 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 ELAVL4P26378 380 aaKnown RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 WIPI1Q5MNZ9 446 aaPredicted RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 MEX3BQ6ZN04 569 aaKnown RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 Q6ZSR9 355 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 ZCCHC23Q6ZST2 131 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 SLC44A2Q8IWA5 706 aaPredicted RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 OR4N2Q8NGD1 307 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 TCP10LQ8TDR4 215 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 GFM2Q969S9 779 aaKnown RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 SLC35A4Q96G79 324 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 SPOCK3Q9BQ16 436 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 ROPN1BQ9BZX4 212 aaPredicted RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 ENKD1Q9H0I2 346 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 STMN4Q9H169 189 aaPredicted RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 ROPN1Q9HAT0 212 aaPredicted RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 TAS2R7Q9NYW3 318 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 MAPRE3Q9UPY8 281 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 WBP11Q9Y2W2 641 aaKnown RBP18.38■□□□□ 0.53
CTTN-205ENST00000415461 PCDHGB3Q9Y5G1 929 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 DNAJC15Q9Y5T4 150 aa18.38■□□□□ 0.53
CTTN-205ENST00000415461 NINQ8N4C6 2090 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 KDM4EB2RXH2 506 aaPredicted RBP18.37■□□□□ 0.53
CTTN-205ENST00000415461 NPHS1O60500 1241 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 TSPAN2O60636 221 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 COQ9O75208 318 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 LINC00032P0C843 101 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 NEFHP12036 1026 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 SDC1P18827 310 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 IL12BP29460 328 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 RPL38P63173 70 aaKnown RBP18.37■□□□□ 0.53
CTTN-205ENST00000415461 SNTA1Q13424 505 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 DCST1Q5T197 706 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 ANKRD26P1Q6NSI1 321 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 RNF165Q6ZSG1 346 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 SEM1Q6ZVN7 128 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 LARP4Q71RC2 724 aaKnown RBP eCLIP18.37■□□□□ 0.53
CTTN-205ENST00000415461 FAM83FQ8NEG4 500 aaPredicted RBP18.37■□□□□ 0.53
CTTN-205ENST00000415461 TWIST2Q8WVJ9 160 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 EFHD2Q96C19 240 aaPredicted RBP18.37■□□□□ 0.53
CTTN-205ENST00000415461 METTL2AQ96IZ6 378 aaKnown RBP18.37■□□□□ 0.53
CTTN-205ENST00000415461 FCRL1Q96LA6 429 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 AMDHD1Q96NU7 426 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 TIMP4Q99727 224 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 KCNJ16Q9NPI9 418 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 SERHLQ9NQF3 203 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 DDX18Q9NVP1 670 aaKnown RBP18.37■□□□□ 0.53
CTTN-205ENST00000415461 TAS2R9Q9NYW1 312 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 C19orf53Q9UNZ5 99 aaPredicted RBP18.37■□□□□ 0.53
CTTN-205ENST00000415461 OR10H1Q9Y4A9 318 aa18.37■□□□□ 0.53
CTTN-205ENST00000415461 A0A087WV62 115 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 UPK1AO00322 258 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 ABCB7O75027 752 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 CHEK2O96017 543 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 HOXD4P09016 255 aaPredicted RBP18.36■□□□□ 0.53
CTTN-205ENST00000415461 IGFBP2P18065 325 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 MSX1P28360 303 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 KRT20P35900 424 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 ZFP36L2P47974 494 aaKnown RBP18.36■□□□□ 0.53
CTTN-205ENST00000415461 WNT3P56703 355 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 PSG6Q00889 435 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 ACSF3Q4G176 576 aaPredicted RBP18.36■□□□□ 0.53
CTTN-205ENST00000415461 RFTN2Q52LD8 501 aaPredicted RBP18.36■□□□□ 0.53
CTTN-205ENST00000415461 ARL13AQ5H913 290 aaPredicted RBP18.36■□□□□ 0.53
CTTN-205ENST00000415461 SH2D4BQ5SQS7 431 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 WDR53Q7Z5U6 358 aaPredicted RBP18.36■□□□□ 0.53
CTTN-205ENST00000415461 YRDCQ86U90 279 aaKnown RBP18.36■□□□□ 0.53
CTTN-205ENST00000415461 LIX1LQ8IVB5 337 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 DDIASQ8IXT1 998 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 OR2L13Q8N349 312 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 WDSUB1Q8N9V3 476 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 CLHC1Q8NHS4 586 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 AGR3Q8TD06 166 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 TMCO6Q96DC7 493 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 TSSK3Q96PN8 268 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 CCT7Q99832 543 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 TREX2Q9BQ50 279 aaPredicted RBP18.36■□□□□ 0.53
CTTN-205ENST00000415461 UGT2B28Q9BY64 529 aa18.36■□□□□ 0.53
CTTN-205ENST00000415461 TACC2O95359 2948 aa18.35■□□□□ 0.53
CTTN-205ENST00000415461 PLOD2O00469 737 aa18.35■□□□□ 0.53
CTTN-205ENST00000415461 PIP5K1BO14986 540 aa18.35■□□□□ 0.53
CTTN-205ENST00000415461 LSM1O15116 133 aaKnown RBP18.35■□□□□ 0.53
CTTN-205ENST00000415461 AKAP10O43572 662 aa18.35■□□□□ 0.53
CTTN-205ENST00000415461 ZNF500O60304 480 aaPredicted RBP18.35■□□□□ 0.53
CTTN-205ENST00000415461 SLITRK5O94991 958 aa18.35■□□□□ 0.53
CTTN-205ENST00000415461 PSMG1O95456 288 aa18.35■□□□□ 0.53
CTTN-205ENST00000415461 BMP7P18075 431 aa18.35■□□□□ 0.53
CTTN-205ENST00000415461 ARRB2P32121 409 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms