RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 KRT6AP02538 564 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 KRT6BP04259 564 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 NAGAP17050 411 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 KRT6CP48668 564 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 FOXA1P55317 472 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 PKNOX1P55347 436 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 MRPS35P82673 323 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 HSPB2Q16082 182 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZCCHC23Q6ZST2 131 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 FRMD7Q6ZUT3 714 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 YRDCQ86U90 279 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 CDC20BQ86Y33 519 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 FAM83FQ8NEG4 500 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 MBD3L2Q8NHZ7 208 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 RNASE6Q93091 150 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 FOXC2Q99958 501 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 WDR41Q9HAD4 459 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 GALNT9Q9HCQ5 603 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 B4GALT7Q9UBV7 327 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZNF629Q9UEG4 869 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 STK38LQ9Y2H1 464 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 GPR55Q9Y2T6 319 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 CD8B2A6NJW9 211 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 TP53I11O14683 189 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 SNPHO15079 494 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 TO15178 435 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 TSPAN2O60636 221 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 BPGMP07738 259 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 CT45A8P0DMV1 189 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 CT45A9P0DMV2 189 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 CPN1P15169 458 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 PCSK2P16519 638 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 DRD5P21918 477 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 BMP5P22003 454 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 UQCRC1P31930 480 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 KIR2DL3P43628 341 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 HTR6P50406 440 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 MAPK12P53778 367 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 GAS1P54826 345 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 NAA20P61599 178 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 MPP2Q14168 576 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 DAZAP2Q15038 168 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 CT45A2Q5DJT8 189 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZNF628Q5EBL2 1059 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 NUP54Q7Z3B4 507 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 LACC1Q8IV20 430 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 NUDCD3Q8IVD9 361 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 VWA5B2Q8N398 1253 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 C1orf52Q8N6N3 182 aaKnown RBP11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 OMA1Q96E52 524 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 LCORQ96JN0 433 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 PKNOX2Q96KN3 472 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 STMN4Q9H169 189 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 BRF2Q9HAW0 419 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 TMBIM4Q9HC24 238 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 TNFRSF12AQ9NP84 129 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 ARGLU1Q9NWB6 273 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 AHSPQ9NZD4 102 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 EHD3Q9NZN3 535 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 ST6GALNAC2Q9UJ37 374 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 EXO1Q9UQ84 846 aaKnown RBP11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 FIS1Q9Y3D6 152 aa11.31□□□□□ -0.6
NCKIPSD-203ENST00000415281 A6NNC1 897 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ERAL1O75616 437 aaKnown RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZWINTO95229 277 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ENO1P06733 434 aaKnown RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 CD1EP15812 388 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 H2AFXP16104 143 aaPredicted RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 HOXB4P17483 251 aaPredicted RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 CSNK2A2P19784 350 aaPredicted RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ETV4P43268 484 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 PPICP45877 212 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 STARP49675 285 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ASCL1P50553 236 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 GFRA1P56159 465 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 CLDN15P56746 228 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 BTKQ06187 659 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 CEBPEQ15744 281 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 FLYWCH1Q4VC44 716 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 C10orf62Q5T681 223 aaPredicted RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 CLEC6AQ6EIG7 209 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ANGPTL8Q6UXH0 198 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 NPSR1Q6W5P4 371 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 CCDC116Q8IYX3 515 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 LIX1Q8N485 282 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ANKRD42Q8N9B4 389 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 OR52R1Q8NGF1 315 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 PPP1R14CQ8TAE6 165 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 LINC01560Q8TB33 94 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZPLD1Q8TCW7 415 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 ABTB1Q969K4 478 aaPredicted RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 HSPBAP1Q96EW2 488 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 APIPQ96GX9 242 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 TRIB1Q96RU8 372 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 PAIP2Q9BPZ3 127 aaKnown RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 TUBA1CQ9BQE3 449 aa11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 POLDIP3Q9BY77 421 aaKnown RBP11.3□□□□□ -0.6
NCKIPSD-203ENST00000415281 RTN4RQ9BZR6 473 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms