RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 MC2RQ01718 297 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SEMG2Q02383 582 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CXCL9Q07325 125 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ASAH1Q13510 395 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ELAVL3Q14576 367 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 RAB39AQ14964 217 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TAF1AQ15573 450 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 EFNB3Q15768 340 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 UGCGQ16739 394 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF699Q32M78 642 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ITPRIPL2Q3MIP1 535 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF568Q3ZCX4 644 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SLC36A2Q495M3 483 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 LRRC24Q50LG9 513 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ESCO2Q56NI9 601 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DCAF6Q58WW2 860 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 KIAA1755Q5JYT7 1200 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM63BQ5T3F8 832 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ABHD17BQ5VST6 288 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MARC1Q5VT66 337 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 PRAMEF7Q5VXH5 474 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CD276Q5ZPR3 534 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CYB5R2Q6BCY4 276 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TXNRD3NBQ6F5E7 133 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 RNASEKQ6P5S7 137 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SLC39A4Q6P5W5 647 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ULK3Q6PHR2 472 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DHRS4L2Q6PKH6 230 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SPESP1Q6UW49 350 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 B3GLCTQ6Y288 498 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 RRM2BQ7LG56 351 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF546Q86UE3 836 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF589Q86UQ0 364 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 LACC1Q8IV20 430 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DCUN1D3Q8IWE4 304 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZC3H3Q8IXZ2 948 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF683Q8IZ20 524 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SPAG16Q8N0X2 631 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZFP82Q8N141 532 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 GABRG1Q8N1C3 465 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 RIBC1Q8N443 379 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 STX19Q8N4C7 294 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SPATA6LQ8N4H0 392 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 AMER3Q8N944 861 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 OR51D1Q8NGF3 324 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 AGAP11Q8TF27 550 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 GDPD5Q8WTR4 605 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 UBTD2Q8WUN7 234 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 RAB40AQ8WXH6 277 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SUSD6Q92537 303 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 FCGR1BQ92637 280 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 HAS1Q92839 578 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 GLG1Q92896 1179 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ERGIC1Q969X5 290 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DCPSQ96C86 337 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TM4SF19Q96DZ7 209 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 FBXO17Q96EF6 278 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SENP5Q96HI0 755 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 PPP1R16AQ96I34 528 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 AKR1E2Q96JD6 320 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 KLHL15Q96M94 604 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SFXN2Q96NB2 322 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TECTBQ96PL2 329 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SLC38A2Q96QD8 506 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 RAB40CQ96S21 281 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 IL12RB2Q99665 862 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CMKLR1Q99788 373 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CPNE1Q99829 537 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF559Q9BR84 538 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TCEAL7Q9BRU2 100 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ADI1Q9BV57 179 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 SCNM1Q9BWG6 230 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 NPLQ9BXD5 320 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CCDC90BQ9GZT6 254 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 NAT10Q9H0A0 1025 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 PLK3Q9H4B4 646 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 EBF3Q9H4W6 596 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 KAT8Q9H7Z6 458 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF430Q9H8G1 570 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DDX31Q9H8H2 851 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MTHFD2LQ9H903 347 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 L2HGDHQ9H9P8 463 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 GPN2Q9H9Y4 310 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 BARX1Q9HBU1 254 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZBTB26Q9HCK0 441 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 KRCC1Q9NPI7 259 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DLL4Q9NR61 685 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 OLFML3Q9NRN5 406 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 LYARQ9NX58 379 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MTMR10Q9NXD2 777 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TREM2Q9NZC2 230 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 GLS2Q9UI32 602 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 PHF11Q9UIL8 331 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CD207Q9UJ71 328 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ADAM29Q9UKF5 820 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 FBXL3Q9UKT7 428 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 NFU1Q9UMS0 254 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 FLVCR2Q9UPI3 526 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 EXO1Q9UQ84 846 aaKnown RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DRG1Q9Y295 367 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms