RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CACNA1CQ13936 2221 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 TRGV5A0A0B4J1U4 118 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 C2orf72A6NCS6 295 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 UPK1AO00322 258 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 GNB5O14775 395 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 TBX19O60806 448 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 COQ9O75208 318 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 BGNP21810 368 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 MAPK1P28482 360 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 ASMTP46597 345 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 SLC1A6P48664 564 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 TRPC1P48995 793 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 SMSP52788 366 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 PSG6Q00889 435 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF155Q12901 538 aaPredicted RBP13.56□□□□□ -0.24
LIMS4-201ENST00000413601 PDE7AQ13946 482 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 GXYLT1Q4G148 440 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF787Q6DD87 383 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 WDR53Q7Z5U6 358 aaPredicted RBP13.56□□□□□ -0.24
LIMS4-201ENST00000413601 OR2L13Q8N349 312 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 ANKRD42Q8N9B4 389 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 TUBGCP3Q96CW5 907 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 NTNG2Q96CW9 530 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF764Q96H86 408 aaPredicted RBP13.56□□□□□ -0.24
LIMS4-201ENST00000413601 COL21A1Q96P44 957 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 GNRHR2Q96P88 292 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 ADOQ96SZ5 270 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 SLC6A15Q9H2J7 730 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 TP63Q9H3D4 680 aaPredicted RBP13.56□□□□□ -0.24
LIMS4-201ENST00000413601 GALNT9Q9HCQ5 603 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 PNPLA3Q9NST1 481 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 DDX18Q9NVP1 670 aaKnown RBP13.56□□□□□ -0.24
LIMS4-201ENST00000413601 QPCTLQ9NXS2 382 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 KLRF1Q9NZS2 232 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 B4GALT7Q9UBV7 327 aa13.56□□□□□ -0.24
LIMS4-201ENST00000413601 OR14I1A6ND48 311 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 OR6C70A6NIJ9 312 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 PRSS44E7EML9 344 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 AQP7O14520 342 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 TSPAN2O60636 221 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 HCN1O60741 890 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 ICOSLGO75144 302 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 TRAPPC6AO75865 159 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 PSMG1O95456 288 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 EFNA1P20827 205 aaPredicted RBP13.55□□□□□ -0.24
LIMS4-201ENST00000413601 ENDOUP21128 410 aaKnown RBP13.55□□□□□ -0.24
LIMS4-201ENST00000413601 GRK2P25098 689 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 GPC1P35052 558 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 DCTP40126 519 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 PTGDSP41222 190 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 MANFP55145 182 aaKnown RBP13.55□□□□□ -0.24
LIMS4-201ENST00000413601 STX3Q13277 289 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 PTGR1Q14914 329 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 CDSNQ15517 529 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 PDCD2Q16342 344 aaPredicted RBP13.55□□□□□ -0.24
LIMS4-201ENST00000413601 HHATQ5VTY9 493 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 IL23RQ5VWK5 629 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 SLC30A6Q6NXT4 461 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 TMEM81Q6P7N7 255 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 XKRXQ6PP77 449 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 ANGPTL8Q6UXH0 198 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 LARP4Q71RC2 724 aaKnown RBP eCLIP13.55□□□□□ -0.24
LIMS4-201ENST00000413601 EID3Q8N140 333 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 RPRMLQ8N4K4 120 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 MARVELD2Q8N4S9 558 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 FNDC5Q8NAU1 212 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 OR7A2PQ8NGA2 310 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 PHF10Q8WUB8 498 aaKnown RBP13.55□□□□□ -0.24
LIMS4-201ENST00000413601 EFHD2Q96C19 240 aaPredicted RBP13.55□□□□□ -0.24
LIMS4-201ENST00000413601 TMCO6Q96DC7 493 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 MTERF3Q96E29 417 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 SLC35A4Q96G79 324 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 TMEM41AQ96HV5 264 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 PPP1R36Q96LQ0 422 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 SORT1Q99523 831 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 OSBPL11Q9BXB4 747 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 ACKR4Q9NPB9 350 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 SPRR3Q9UBC9 169 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 ACAD8Q9UKU7 415 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 C15orf41Q9Y2V0 281 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 OR10H1Q9Y4A9 318 aa13.55□□□□□ -0.24
LIMS4-201ENST00000413601 CACNA1DQ01668 2161 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 TMEM120BA0PK00 339 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 PRAMEF25A6NGN4 478 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 BCKDKO14874 412 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 SCAMP2O15127 329 aaKnown RBP13.54□□□□□ -0.24
LIMS4-201ENST00000413601 IL12BP29460 328 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 KRT20P35900 424 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 HPCAL1P37235 193 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 FRKP42685 505 aaPredicted RBP13.54□□□□□ -0.24
LIMS4-201ENST00000413601 CDK9P50750 372 aaKnown RBP13.54□□□□□ -0.24
LIMS4-201ENST00000413601 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
LIMS4-201ENST00000413601 WDR4P57081 412 aaKnown RBP13.54□□□□□ -0.24
LIMS4-201ENST00000413601 MAGOHP61326 146 aaKnown RBP13.54□□□□□ -0.24
LIMS4-201ENST00000413601 SNTA1Q13424 505 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 ART3Q13508 389 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 TOMM20Q15388 145 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 TIGD3Q6B0B8 471 aa13.54□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF585AQ6P3V2 769 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms