RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 KLF13Q9Y2Y9 288 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-206ENST00000412056 CHCHD2Q9Y6H1 151 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-206ENST00000412056 RNF103-CHMP3A0A140T963 221 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 GXYLT2A0PJZ3 443 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 FAM234BA2RU67 622 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 REM1O75628 298 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 IL6P05231 212 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 CD1EP15812 388 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 MAP3K8P41279 467 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 CDKN2CP42773 168 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 PRIM2P49643 509 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 MEOX1P50221 254 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 ARFIP2P53365 341 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 SEC24CP53992 1094 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 LASP1Q14847 261 aaKnown RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 ZNHIT3Q15649 155 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 EXOSC6Q5RKV6 272 aaKnown RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 SLC22A10Q63ZE4 541 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 FUNDC1Q8IVP5 155 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 SULF2Q8IWU5 870 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 DND1Q8IYX4 353 aaKnown RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 CPSF7Q8N684 471 aaKnown RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 CDRT4Q8N9R6 151 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 OR56A1Q8NGH5 318 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 SPPL2AQ8TCT8 520 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 GRHL3Q8TE85 626 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 PAQR8Q8TEZ7 354 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 C10orf82Q8WW14 230 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 SLC9A6Q92581 669 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 JADE3Q92613 823 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 HGDQ93099 445 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 VPS33AQ96AX1 596 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 SGCZQ96LD1 299 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 FRMD6Q96NE9 622 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 Q9N2J8 555 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 SACM1LQ9NTJ5 587 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 GPATCH2Q9NW75 528 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 CNOT11Q9UKZ1 510 aaKnown RBP12.83□□□□□ -0.36
CPNE1-206ENST00000412056 OR10H1Q9Y4A9 318 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 PCNX3Q9H6A9 2034 aa12.83□□□□□ -0.36
CPNE1-206ENST00000412056 PINLYPA6NC86 204 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 ASPDHA6ND91 283 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 TTC36A6NLP5 189 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 CAPN14A8MX76 684 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 NR5A2O00482 541 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 PEX1O43933 1283 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 TSPAN2O60636 221 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 UGT2B11O75310 529 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 NKX2-2O95096 273 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 P04436 131 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 NAGAP17050 411 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 UQCRC2P22695 453 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 LSP1P33241 339 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 GABRA3P34903 492 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 PIGAP37287 484 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 RFC3P40938 356 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 DNASE1L1P49184 302 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 GNGT1P63211 74 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 DUSP5Q16690 384 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 AGKQ53H12 422 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 BICRALQ6AI39 1079 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 FAM180AQ6UWF9 173 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 DNAJC14Q6Y2X3 702 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-206ENST00000412056 ZNF605Q86T29 641 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 FBXW8Q8N3Y1 598 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 FAM98AQ8NCA5 519 aaKnown RBP12.82□□□□□ -0.36
CPNE1-206ENST00000412056 SLC16A11Q8NCK7 471 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 OR2M7Q8NG81 312 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 GOT1L1Q8NHS2 421 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-206ENST00000412056 GPR151Q8TDV0 419 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 PIK3R3Q92569 461 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 MOAP1Q96BY2 351 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 EFHD2Q96C19 240 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-206ENST00000412056 RMND5BQ96G75 393 aaPredicted RBP12.82□□□□□ -0.36
CPNE1-206ENST00000412056 NODALQ96S42 347 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 SERHL2Q9H4I8 314 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 PROK2Q9HC23 129 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 SERHLQ9NQF3 203 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 CCDC167Q9P0B6 97 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 CBLCQ9ULV8 474 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 TRIM33Q9UPN9 1127 aa12.82□□□□□ -0.36
CPNE1-206ENST00000412056 KLRC4-KLRK1H3BQV0 150 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 PYCARD-AS1I3L0S3 204 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 TP53I11O14683 189 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 C1QCP02747 245 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 GSNP06396 782 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 ALOX5P09917 674 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 CAPN3P20807 821 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 CNR1P21554 472 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 IL12BP29460 328 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 KRT20P35900 424 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 KCNK10P57789 538 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 RPS26P62854 115 aaKnown RBP12.81□□□□□ -0.36
CPNE1-206ENST00000412056 IRX1P78414 480 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-206ENST00000412056 GTF3C1Q12789 2109 aa12.81□□□□□ -0.36
CPNE1-206ENST00000412056 RCAN2Q14206 197 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms