RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 SEC14L3Q9UDX4 400 aa18.6■□□□□ 0.57
LIMS2-207ENST00000409808 DIMT1Q9UNQ2 313 aaKnown RBP18.6■□□□□ 0.57
LIMS2-207ENST00000409808 SNX11Q9Y5W9 270 aa18.6■□□□□ 0.57
LIMS2-207ENST00000409808 IRGMA1A4Y4 181 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 MYL12BO14950 172 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 LGI1O95970 557 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 DCNP07585 359 aaKnown RBP18.59■□□□□ 0.57
LIMS2-207ENST00000409808 CKMT1AP12532 417 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 CCR8P51685 355 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 TRA2BP62995 288 aaKnown RBP18.59■□□□□ 0.57
LIMS2-207ENST00000409808 SPATA5L1Q9BVQ7 753 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 NEK6Q9HC98 313 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 SIRT3Q9NTG7 399 aaPredicted RBP18.59■□□□□ 0.57
LIMS2-207ENST00000409808 ERVK13-1Q9NX77 482 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 P2RX2Q9UBL9 471 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 CLEC2DQ9UHP7 191 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 KLHL20Q9Y2M5 609 aa18.59■□□□□ 0.57
LIMS2-207ENST00000409808 FAM227AF5H4B4 570 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 RGS13O14921 159 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 LCMT2O60294 686 aaKnown RBP18.58■□□□□ 0.57
LIMS2-207ENST00000409808 ZNF217O75362 1048 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 TBX6O95947 436 aaPredicted RBP18.58■□□□□ 0.57
LIMS2-207ENST00000409808 TNFP01375 233 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 IL1AP01583 271 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 RPS26P62854 115 aaKnown RBP18.58■□□□□ 0.57
LIMS2-207ENST00000409808 TARDBPQ13148 414 aaKnown RBP eCLIP18.58■□□□□ 0.57
LIMS2-207ENST00000409808 FZD2Q14332 565 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 RSBN1Q5VWQ0 802 aaPredicted RBP18.58■□□□□ 0.57
LIMS2-207ENST00000409808 DEF8Q6ZN54 512 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 TCEANCQ8N8B7 351 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 TAS2R7Q9NYW3 318 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 TBC1D24Q9ULP9 559 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 COLEC10Q9Y6Z7 277 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 SDK1Q7Z5N4 2213 aa18.58■□□□□ 0.57
LIMS2-207ENST00000409808 A6NCN8 305 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 RGS5O15539 181 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 TPST2O60704 377 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 SEMA7AO75326 666 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 STATHP02808 62 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 HTR3AP46098 478 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 CCT3P49368 545 aaKnown RBP18.58■□□□□ 0.56
LIMS2-207ENST00000409808 PSPHP78330 225 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 PRDX1Q06830 199 aaKnown RBP18.58■□□□□ 0.56
LIMS2-207ENST00000409808 C1orf61Q13536 156 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 TP53BP2Q13625 1128 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 KLHL22Q53GT1 634 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 NUDT13Q86X67 352 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 TBC1D19Q8N5T2 526 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 CLDN22Q8N7P3 220 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 CELF2-AS1Q8N7Q2 184 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 ASB15Q8WXK1 588 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 BARHL1Q9BZE3 327 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 ZNF221Q9UK13 617 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 CMAHPQ9Y471 501 aa18.58■□□□□ 0.56
LIMS2-207ENST00000409808 SPTY2D1-AS1A0A0U1RR47 76 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 SLC28A2O43868 658 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 SOX14O95416 240 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 RAB36O95755 333 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 HOXB3P14651 431 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-207ENST00000409808 SOX3P41225 446 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 CSNK1G2P78368 415 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 DOC2BQ14184 412 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 ARMC4Q5T2S8 1044 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 WASH2PQ6VEQ5 465 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 PHC2Q8IXK0 858 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 FBXL6Q8N531 539 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 FAM181AQ8N9Y4 354 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 LCN9Q8WX39 176 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 RAB8BQ92930 207 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 RGMAQ96B86 450 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 F2RL3Q96RI0 385 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 OR2B2Q9GZK3 357 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 ISYNA1Q9NPH2 558 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 C14orf119Q9NWQ9 140 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 PCOLCE2Q9UKZ9 415 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 HEBP2Q9Y5Z4 205 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 V9GYH0 126 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 OR1F1O43749 312 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 PRICKLE3O43900 615 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-207ENST00000409808 NME6O75414 186 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-207ENST00000409808 F3P13726 295 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 PPP2R1BP30154 601 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 REEP5Q00765 189 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 ILF3Q12906 894 aaKnown RBP eCLIP18.57■□□□□ 0.56
LIMS2-207ENST00000409808 FOXD4Q12950 439 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-207ENST00000409808 SLC7A13Q8TCU3 470 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 KIR3DX1Q9H7L2 352 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 SLC6A20Q9NP91 592 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 MRPS18AQ9NVS2 196 aaKnown RBP18.57■□□□□ 0.56
LIMS2-207ENST00000409808 A4GNTQ9UNA3 340 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 SLC9A8Q9Y2E8 581 aa18.57■□□□□ 0.56
LIMS2-207ENST00000409808 TP53P04637 393 aaPredicted RBP18.56■□□□□ 0.56
LIMS2-207ENST00000409808 HBQ1P09105 142 aa18.56■□□□□ 0.56
LIMS2-207ENST00000409808 TRAPPC2P0DI81 140 aa18.56■□□□□ 0.56
LIMS2-207ENST00000409808 TRAPPC2BP0DI82 140 aa18.56■□□□□ 0.56
LIMS2-207ENST00000409808 CPEP16870 476 aa18.56■□□□□ 0.56
LIMS2-207ENST00000409808 GSTM3P21266 225 aa18.56■□□□□ 0.56
LIMS2-207ENST00000409808 FEN1P39748 380 aaKnown RBP18.56■□□□□ 0.56
LIMS2-207ENST00000409808 ANXA11P50995 505 aaKnown RBP18.56■□□□□ 0.56
LIMS2-207ENST00000409808 BNC1Q01954 994 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms