RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ASIC5Q9NY37 505 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 TINAGQ9UJW2 476 aa16.46■□□□□ 0.23
PDLIM2-206ENST00000409141 DIDO1Q9BTC0 2240 aaKnown RBP16.46■□□□□ 0.22
PDLIM2-206ENST00000409141 SETXQ7Z333 2677 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 SPTBN1Q01082 2364 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 PRRG2O14669 202 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 UGT2B11O75310 529 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 TRIM3O75382 744 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 PSMG1O95456 288 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 IFI6P09912 130 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 RFPL3SP0C7P2 107 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 EFNA1P20827 205 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 PRKAG1P54619 331 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 ZNHIT3Q15649 155 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 ARHGAP11AQ6P4F7 1023 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 LARP4Q71RC2 724 aaKnown RBP eCLIP16.45■□□□□ 0.226e-7■■□□□ 13.2
PDLIM2-206ENST00000409141 NUDT8Q8WV74 236 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 TMCO6Q96DC7 493 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 ZNF597Q96LX8 424 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 COL21A1Q96P44 957 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 NODALQ96S42 347 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 ADOQ96SZ5 270 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 VIPAS39Q9H9C1 493 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 MEAF6Q9HAF1 191 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 C3orf14Q9HBI5 128 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 PLSCR2Q9NRY7 297 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 SUCOQ9UBS9 1254 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 B4GALT7Q9UBV7 327 aa16.45■□□□□ 0.22
PDLIM2-206ENST00000409141 DOPEY1Q5JWR5 2465 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 NINQ8N4C6 2090 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 A0A1W2PRB8 838 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 OR6C70A6NIJ9 312 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 LRRC3CA6NJW4 275 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 ABCB7O75027 752 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 CELA3AP09093 270 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 KITP10721 976 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 ESRRAP11474 423 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 LBPP18428 481 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 IL12BP29460 328 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 MASP1P48740 699 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 CDK9P50750 372 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 DIO3P55073 304 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 CLDN8P56748 225 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 PSG6Q00889 435 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 TTMPQ5BVD1 217 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 MYO7BQ6PIF6 2116 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 RIMKLAQ8IXN7 391 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 OR4N2Q8NGD1 307 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 CEP70Q8NHQ1 597 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 LDAHQ9H6V9 325 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 EQTNQ9NQ60 294 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 KLRF1Q9NZS2 232 aa16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 MARCOQ9UEW3 520 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-206ENST00000409141 COL12A1Q99715 3063 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 ZG16O60844 167 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 IGHG3P01860 377 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 TPOP07202 933 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 PNLIPRP2P54317 469 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 GAB1Q13480 694 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 EFR3AQ14156 821 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 MLC1Q15049 377 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 SLC30A6Q6NXT4 461 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 MTFR2Q6P444 385 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 SZRD1Q7Z422 152 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 WDR53Q7Z5U6 358 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 DOLPP1Q86YN1 238 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 NATD1Q8N6N6 113 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 NUP43Q8NFH3 380 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 FAM57AQ8TBR7 257 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 ZNF75CPQ92670 426 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 COQ8BQ96D53 544 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 SLC35A4Q96G79 324 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 SH3GL2Q99962 352 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 EXO5Q9H790 373 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 ZNF703Q9H7S9 590 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 Q9N2J8 555 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 CBLCQ9ULV8 474 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 LIPGQ9Y5X9 500 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 GTF3C1Q12789 2109 aa16.43■□□□□ 0.22
PDLIM2-206ENST00000409141 HDAC3O15379 428 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 EMC8O43402 210 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 TSPAN2O60636 221 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 ICOSLGO75144 302 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 GDF1P27539 372 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 MRPS22P82650 360 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 OCRLQ01968 901 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 SNTA1Q13424 505 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 DECR1Q16698 335 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 PGS1Q32NB8 556 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 LSM12Q3MHD2 195 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 CYP27C1Q4G0S4 372 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 TMEM81Q6P7N7 255 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 TRILQ7L0X0 811 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 WDR75Q8IWA0 830 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 LRRC34Q8IZ02 419 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 OR5P2Q8WZ92 322 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 EFHD2Q96C19 240 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 TMEM41AQ96HV5 264 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 GNRHR2Q96P88 292 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 LMF2Q9BU23 707 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms